Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpfA gene

Properties
Regulator type: RNA regulatory element
Name: ydaO-yuaA
RFAM: RF00379
Regulation mode:
Biological process: Osmotic stress response; Cell wall metabolism
Effector:
Phylum: Actinobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium abscessus ATCC 19977
Position: -217
Score: 54.04
Sequence: CCATACCCGCGCACC...
Locus tag: MAB_0869c
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -217 54 CCATACCCGCGCACC... MAB_0869c
Mycobacterium avium 104
Position: -296
Score: 40.57
Sequence: CCTCCCTATCGCGCC...
Locus tag: MAV_0996
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -296 40.6 CCTCCCTATCGCGCC... MAV_0996
Mycobacterium flavescens PYR-GCK
Position: -227
Score: 67.57
Sequence: ACCACCGATTGCGCC...
Locus tag: Mflv_1703
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -227 67.6 ACCACCGATTGCGCC... Mflv_1703
Mycobacterium leprae TN
Position: -193
Score: 39.48
Sequence: AGGCGGGGACGCTAA...
Locus tag: ML2151
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -193 39.5 AGGCGGGGACGCTAA... ML2151
Mycobacterium marinum M
Position: -222
Score: 58.7
Sequence: CCTACAACGCGCCGA...
Locus tag: MMAR_4665
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -222 58.7 CCTACAACGCGCCGA... MMAR_4665
Mycobacterium smegmatis str. MC2 155
Position: -216
Score: 58.58
Sequence: CGCCGGTAGCGCCGA...
Locus tag: MSMEG_5700
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -216 58.6 CGCCGGTAGCGCCGA... MSMEG_5700
Mycobacterium sp. JLS
Position: -213
Score: 40.72
Sequence: GCCCGATAGCGCCGA...
Locus tag: Mjls_4862
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -213 40.7 GCCCGATAGCGCCGA... Mjls_4862
Mycobacterium tuberculosis H37Rv
Position: -233
Score: 49.86
Sequence: CGCCGATAGCACGCC...
Locus tag: Rv0867c
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -233 49.9 CGCCGATAGCACGCC... Rv0867c
Mycobacterium vanbaalenii PYR-1
Position: -222
Score: 63.06
Sequence: CACCAATTGCGCCGA...
Locus tag: Mvan_5049
Name: rpfA
Funciton: Probable resuscitation-promoting factor RpfA
rpfA -222 63.1 CACCAATTGCGCCGA... Mvan_5049