Orthologous regulated operons containing ykoC gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Actinobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Mycobacterium flavescens PYR-GCK | ||||
|
Position: -101
Score: 47.57 Sequence: TGGACGCACACGGGA...
Locus tag: Mflv_0970
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Mflv_0971
Name: ykoD Funciton: ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Mflv_0972
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
||||
| ykoE-ykoD-ykoC | -101 | 47.6 | TGGACGCACACGGGA... | Mflv_0970 |
| Mycobacterium smegmatis str. MC2 155 | ||||
|
Position: -105
Score: 58.69 Sequence: GAACAACCCACGCGG...
Locus tag: MSMEG_6726
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: MSMEG_6725
Name: ykoD Funciton: ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: MSMEG_6724
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
||||
| ykoE-ykoD-ykoC | -105 | 58.7 | GAACAACCCACGCGG... | MSMEG_6726 |
| Mycobacterium sp. JLS | ||||
|
Position: -102
Score: 53.32 Sequence: CGATAACCCACGCGG...
Locus tag: Mjls_5653
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Mjls_5652
Name: ykoD Funciton: ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Mjls_5651
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
||||
| ykoE-ykoD-ykoC | -102 | 53.3 | CGATAACCCACGCGG... | Mjls_5653 |