Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvB gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Actinobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium abscessus ATCC 19977
Position: -12
Score: 44.71
Sequence: CGGGAGAGTGTCATG...
Locus tag: MAB_2407
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -12 44.7 CGGGAGAGTGTCATG... MAB_2407
Mycobacterium avium 104
Position: -275
Score: 52.02
Sequence: TCGCATTCGAGCGGG...
Position: -180
Score: 32.2
Sequence: ACATGATGCCTCTGG...
Locus tag: MAV_2884
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -275 52 TCGCATTCGAGCGGG... MAV_2884
-180 32.2 ACATGATGCCTCTGG...
Mycobacterium flavescens PYR-GCK
Position: -257
Score: 43.26
Sequence: TCGCCCTTGCGCGGG...
Position: -160
Score: 22.43
Sequence: CCCCGATGCCTCTGG...
Locus tag: Mflv_3398
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -257 43.3 TCGCCCTTGCGCGGG... Mflv_3398
-160 22.4 CCCCGATGCCTCTGG...
Mycobacterium marinum M
Position: -253
Score: 55.66
Sequence: TTGACGCGACGCGGG...
Position: -165
Score: 36.13
Sequence: CCGAGGCGACTCTGG...
Locus tag: MMAR_0211
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: MMAR_0210
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: MMAR_0209
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: MMAR_0208
Name: glyA2
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: MMAR_0207
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvB-gcvT-gcvH-glyA2-sdaA -253 55.7 TTGACGCGACGCGGG... MMAR_0211
-165 36.1 CCGAGGCGACTCTGG...
Mycobacterium smegmatis str. MC2 155
Position: -284
Score: 50.3
Sequence: ATCGACCTGTGCGGG...
Position: -187
Score: 31.42
Sequence: CCACGATGCCTCTGG...
Locus tag: MSMEG_3642
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -284 50.3 ATCGACCTGTGCGGG... MSMEG_3642
-187 31.4 CCACGATGCCTCTGG...
Mycobacterium sp. JLS
Position: -267
Score: 45.07
Sequence: TCGCCCGTGTGCGGG...
Position: -170
Score: 23.75
Sequence: CCTCGATGCCTCTGG...
Locus tag: Mjls_2871
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -267 45.1 TCGCCCGTGTGCGGG... Mjls_2871
-170 23.8 CCTCGATGCCTCTGG...
Mycobacterium tuberculosis H37Rv
Position: -263
Score: 53.68
Sequence: GCTCTAGTGCGGGAG...
Position: -167
Score: 38.92
Sequence: ACGATGCCTCTGGAA...
Locus tag: Rv1832
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -263 53.7 GCTCTAGTGCGGGAG... Rv1832
-167 38.9 ACGATGCCTCTGGAA...
Mycobacterium vanbaalenii PYR-1
Position: -238
Score: 46.72
Sequence: ATCGCCCTGTGCGGG...
Position: -141
Score: 34.29
Sequence: CCCCGATGCCTCTGG...
Locus tag: Mvan_3131
Name: gcvB
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvB -238 46.7 ATCGCCCTGTGCGGG... Mvan_3131
-141 34.3 CCCCGATGCCTCTGG...
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