Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rplJ gene

Properties
Regulator type: RNA regulatory element
Name: L10_leader
RFAM: RF00557
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Deinococcus-Thermus
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Deinococcus deserti VCD115
Position: -120
Score: 20.45
Sequence: ATAGGCCCCAATTCC...
Locus tag: Deide_06060
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: Deide_06050
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -120 20.5 ATAGGCCCCAATTCC... Deide_06060
Deinococcus geothermalis DSM 11300
Position: -118
Score: 22.23
Sequence: CACCTTTCCAATTTC...
Locus tag: Dgeo_0640
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: Dgeo_0639
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -118 22.2 CACCTTTCCAATTTC... Dgeo_0640
Thermus aquaticus Y51MC23
Position: -115
Score: 25.53
Sequence: CAAAGACAGCGGGGG...
Locus tag: TaqDRAFT_4672
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: TaqDRAFT_4673
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -115 25.5 CAAAGACAGCGGGGG... TaqDRAFT_4672
Thermus thermophilus HB27
Position: -123
Score: 21.46
Sequence: GCCAAAGACAGCGGG...
Locus tag: TTC1777
Name: rplJ
Funciton: LSU ribosomal protein L10p (P0)
Locus tag: TTC1776
Name: rplL
Funciton: LSU ribosomal protein L7/L12 (P1/P2)
rplJ-rplL -123 21.5 GCCAAAGACAGCGGG... TTC1777
© 2009-2020 RegPrecise