Orthologous regulated operons containing cbiP gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Deinococcus-Thermus |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Deinococcus geothermalis DSM 11300 | ||||
|
Position: -259
Score: 35.03 Sequence: CCGGCTTCTGCTATC...
Locus tag: Dgeo_2363
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Dgeo_2362
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Dgeo_2361
Name: cbiE Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Locus tag: Dgeo_2360
Name: cbiXC Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Dgeo_2359
Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Dgeo_2358
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Dgeo_2357
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Dgeo_2356
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Dgeo_2355
Name: cbiHJ Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Locus tag: Dgeo_2354
Name: cobW Funciton: Cobalamin synthesis protein
Locus tag: Dgeo_2353
Name: hoxN Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Dgeo_2352
Name: cobN Funciton: Cobaltochelatase, CobN subunit
Locus tag: Dgeo_2351
Name: null Funciton: Methyltransferase type 11
Locus tag: Dgeo_2350
Name: chlID Funciton: Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Locus tag: Dgeo_2349
Name: cbiA Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: Dgeo_2348
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: Dgeo_2875
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Dgeo_2874
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Dgeo_2873
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Dgeo_2872
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
||||
| btuF-btuR-cbiE-cbiXC-cbiD-cbiL-cbiF-cbiG-cbiHJ-cobW-hoxN-cobN-Dgeo_2351-chlID-cbiA-cbiB-cobD-cbiP-cobU-cobT | -259 | 35 | CCGGCTTCTGCTATC... | Dgeo_2363 |
| Deinococcus radiodurans R1 | ||||
|
Position: -100
Score: 13.78 Sequence: GGGGAAGCCCGGTGA...
Locus tag: DRB0007
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: DRB0008
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: DRB0009
Name: cbiA Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: DRB0010
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: DRB0011
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: DRB0012
Name: cbiP Funciton: Cobyric acid synthase |
||||
| btuF-btuR-cbiA-cbiB-cobD-cbiP | -100 | 13.8 | GGGGAAGCCCGGTGA... | DRB0007 |
| Thermus thermophilus HB27 | ||||
|
Position: -209
Score: 45.89 Sequence: AGGGGGAAGACCGGT...
Locus tag: TTP0007
Name: hoxN Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: TTP0008
Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: TTP0009
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: TTP0010
Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: TTP0011
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: TTP0012
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: TTP0013
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: TTP0014
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: TTP0015
Name: cbiX Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: TTP0016
Name: DUF3209 Funciton: Hypothetical protein implicated in coenzyme B12 biosynthesis
Locus tag: TTP0017
Name: cobA Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: TTP0018
Name: bluB Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: TTP0019
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: TTP0020
Name: TTP0020 Funciton: HEPN domain-containing nucleotidyltransferase
Locus tag: TTP0021
Name: TTP0021 Funciton: Nucleotidyltransferase
Locus tag: TTP0022
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: TTP0023
Name: cbiP-cobU Funciton: Cobyric acid synthase / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) |
||||
| hoxN-cbiD-cbiC-cbiET-cbiL-cbiF-cbiH-cbiG-cbiX-DUF3209 -cobA-bluB-cbiB-TTP0020-TTP0021-cobD-cbiP-cobU | -209 | 45.9 | AGGGGGAAGACCGGT... | TTP0007 |