Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Clim_1002 gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Chlorobiales
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chlorobium limicola DSM 245
Position: -509
Score: 74.69
Sequence: TCTTTCTCGTCATAA...
Locus tag: Clim_1001
Name: btuB7
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Clim_1002
Name: null
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Clim_1003
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1004
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Clim_1005
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Clim_1006
Name: btuF2
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1007
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Clim_1008
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Clim_1009
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Clim_1010
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Clim_1011
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Clim_1012
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Clim_1013
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Clim_1014
Name: cbiGF
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
btuB7-Clim_1002-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF -509 74.7 TCTTTCTCGTCATAA... Clim_1001
Prosthecochloris aestuarii DSM 271
Position: -518
Score: 81.88
Sequence: TGTTCTTTCGCTTGT...
Locus tag: Paes_1301
Name: btuB7
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Paes_1300
Name: null
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Paes_1299
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1298
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Paes_1297
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Paes_1296
Name: btuF2
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1295
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Paes_1294
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Paes_1293
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Paes_1292
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Paes_1291
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Paes_1290
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Paes_1289
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Paes_1288
Name: cbiGF
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Paes_1287
Name: cbiJ
Funciton: Precorrin-6x reductase CbiJ (EC 1.3.1.54)
Locus tag: Paes_1286
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
btuB7-Paes_1300-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF-cbiJ-cbiD -518 81.9 TGTTCTTTCGCTTGT... Paes_1301