Orthologous regulated operons containing ucaA gene

Properties
Regulator type:	RNA regulatory element
Name:	ykkC-yxkD
RFAM:	RF00442
Regulation mode:
Biological process:	Multidrug resistance
Effector:
Phylum:	Proteobacteria

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -113 Score: 72.83 Sequence: GAGTTGGTGGCTAGG... Locus tag: AZC_4397 Name: uctB Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: AZC_4398 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: AZC_4399 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein Locus tag: AZC_4400 Name: amt3 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: AZC_4401 Name: amt4 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: AZC_4402 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ... Locus tag: AZC_4403 Name: ucaB2 Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB2	-113	72.8	GAGTTGGTGGCTAGG...	AZC_4397
Rhizobium etli CFN 42
Position: -187 Score: 88.09 Sequence: CTGAGTTGGTGGCTA... Locus tag: RHE_PE00123 Name: uctB Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: RHE_PE00122 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: RHE_PE00121 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein Locus tag: RHE_PE00120 Name: amt3 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: RHE_PE00119 Name: amt4 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: RHE_PE00118 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ... Locus tag: RHE_PE00117 Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB	-187	88.1	CTGAGTTGGTGGCTA...	RHE_PE00123
Rhizobium leguminosarum bv. viciae 3841
Position: -182 Score: 75.22 Sequence: GAGTTGGTGGCTAGG... Locus tag: pRL90288 Name: uctB Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: pRL90289 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: pRL90290 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein Locus tag: pRL90291 Name: amt3 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: pRL90292 Name: amt4 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: pRL90293 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ... Locus tag: pRL90294 Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB	-182	75.2	GAGTTGGTGGCTAGG...	pRL90288
Rhodopseudomonas palustris CGA009
Position: -181 Score: 80.09 Sequence: CAGAGTTGGTGGCTA... Locus tag: RPA1410 Name: uctB Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: RPA1409 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: RPA1408 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein Locus tag: RPA1407 Name: amt3 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: RPA1406 Name: amt4 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: RPA1405 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ... Locus tag: RPA1404 Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB	-181	80.1	CAGAGTTGGTGGCTA...	RPA1410
Xanthobacter autotrophicus Py2
Position: -184 Score: 69.8 Sequence: ACGAGTTGGTGGCTA... Locus tag: Xaut_1227 Name: uctB Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: Xaut_1226 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: Xaut_1225 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein Locus tag: Xaut_1224 Name: amt3 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: Xaut_1223 Name: amt4 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: Xaut_1222 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ... Locus tag: Xaut_1221 Name: ucaB2 Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB2	-184	69.8	ACGAGTTGGTGGCTA...	Xaut_1227