Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing uctB gene

Properties
Regulator type: RNA regulatory element
Name: ykkC-yxkD
RFAM: RF00442
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -113
Score: 72.83
Sequence: GAGTTGGTGGCTAGG...
Locus tag: AZC_4397
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: AZC_4398
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: AZC_4399
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: AZC_4400
Name: amt3
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4401
Name: amt4
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4402
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
Locus tag: AZC_4403
Name: ucaB2
Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB2 -113 72.8 GAGTTGGTGGCTAGG... AZC_4397
Bradyrhizobium sp. BTAi1
Position: -177
Score: 87.97
Sequence: GAGTTGGCAGCTAGG...
Locus tag: BBta_0739
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
uctB -177 88 GAGTTGGCAGCTAGG... BBta_0739
Rhizobium etli CFN 42
Position: -187
Score: 88.09
Sequence: CTGAGTTGGTGGCTA...
Locus tag: RHE_PE00123
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: RHE_PE00122
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: RHE_PE00121
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: RHE_PE00120
Name: amt3
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00119
Name: amt4
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00118
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
Locus tag: RHE_PE00117
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB -187 88.1 CTGAGTTGGTGGCTA... RHE_PE00123
Rhizobium leguminosarum bv. viciae 3841
Position: -182
Score: 75.22
Sequence: GAGTTGGTGGCTAGG...
Locus tag: pRL90288
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: pRL90289
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: pRL90290
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: pRL90291
Name: amt3
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90292
Name: amt4
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90293
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
Locus tag: pRL90294
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB -182 75.2 GAGTTGGTGGCTAGG... pRL90288
Rhizobium sp. NGR234
Position: -202
Score: 82.33
Sequence: CTGCAGATGTTTCTA...
Locus tag: NGR_b03900
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: NGR_b03890
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: NGR_b03880
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: NGR_b03870
Name: speB
Funciton: Agmatinase (EC 3.5.3.11)
uctB-uctP-uctA-speB -202 82.3 CTGCAGATGTTTCTA... NGR_b03900
Rhodopseudomonas palustris CGA009
Position: -181
Score: 80.09
Sequence: CAGAGTTGGTGGCTA...
Locus tag: RPA1410
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: RPA1409
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: RPA1408
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: RPA1407
Name: amt3
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1406
Name: amt4
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1405
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
Locus tag: RPA1404
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB -181 80.1 CAGAGTTGGTGGCTA... RPA1410
Xanthobacter autotrophicus Py2
Position: -184
Score: 69.8
Sequence: ACGAGTTGGTGGCTA...
Locus tag: Xaut_1227
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Locus tag: Xaut_1226
Name: uctP
Funciton: Urea carboxylase-related ABC transporter, permease protein
Locus tag: Xaut_1225
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, ATPase protein
Locus tag: Xaut_1224
Name: amt3
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1223
Name: amt4
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1222
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
Locus tag: Xaut_1221
Name: ucaB2
Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
uctB-uctP-uctA-amt3-amt4-ucaA-ucaB2 -184 69.8 ACGAGTTGGTGGCTA... Xaut_1227
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