Orthologous regulated operons containing ucaB gene
| Regulator type: | RNA regulatory element |
| Name: | mini-ykkC |
| RFAM: | RF01068 |
| Regulation mode: | |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Azorhizobium caulinodans ORS 571 | ||||
|
Position: -76
Score: 36.44 Sequence: GACCGGGACGACCCG...
Locus tag: AZC_4400
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4401
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4402
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: AZC_4403
Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated |
||||
| amt1-amt2-ucaA-ucaB | -76 | 36.4 | GACCGGGACGACCCG... | AZC_4400 |
| Rhizobium etli CFN 42 | ||||
|
Position: -70
Score: 34.69 Sequence: CCGACCGGGACGGCC...
Locus tag: RHE_PE00120
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00119
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00118
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: RHE_PE00117
Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54) |
||||
| amt1-amt2-ucaA-ucaB | -70 | 34.7 | CCGACCGGGACGGCC... | RHE_PE00120 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -74
Score: 37.06 Sequence: GACCGGGACGGCCCG...
Locus tag: pRL90291
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90292
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90293
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: pRL90294
Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54) |
||||
| amt1-amt2-ucaA-ucaB | -74 | 37.1 | GACCGGGACGGCCCG... | pRL90291 |
| Rhodopseudomonas palustris CGA009 | ||||
|
Position: -73
Score: 35.98 Sequence: CCGGCCGGGACGACC...
Locus tag: RPA1407
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1406
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1405
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: RPA1404
Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54) |
||||
| amt1-amt2-ucaA-ucaB | -73 | 36 | CCGGCCGGGACGACC... | RPA1407 |
| Xanthobacter autotrophicus Py2 | ||||
|
Position: -79
Score: 36.69 Sequence: CAGGCCGGGACGACC...
Locus tag: Xaut_1224
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1223
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1222
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: Xaut_1221
Name: ucaB Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated |
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| amt1-amt2-ucaA-ucaB | -79 | 36.7 | CAGGCCGGGACGACC... | Xaut_1224 |