Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykkc gene

Properties
Regulator type: RNA regulatory element
Name: mini-ykkC
RFAM: RF01068
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mesorhizobium loti MAFF303099
Position: -112
Score: 44.44
Sequence: CGCGGGGACGACCCC...
Locus tag: mlr4864
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -112 44.4 CGCGGGGACGACCCC... mlr4864
Mesorhizobium sp. BNC1
Position: -66
Score: 34.03
Sequence: TGCAGGGACGGCCTT...
Locus tag: Meso_0982
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -66 34 TGCAGGGACGGCCTT... Meso_0982
Nitrobacter winogradskyi Nb-255
Position: -55
Score: 38.06
Sequence: CGGAAGGACGACCTT...
Locus tag: Nwi_2028
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -55 38.1 CGGAAGGACGACCTT... Nwi_2028
Rhizobium etli CFN 42
Position: -74
Score: 22.55
Sequence: ATCGCAGACGACTGC...
Locus tag: RHE_CH02230
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -74 22.5 ATCGCAGACGACTGC... RHE_CH02230
Rhizobium leguminosarum bv. viciae 3841
Position: -75
Score: 29.48
Sequence: ATCGCAGACGACTGC...
Locus tag: RL2561
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -75 29.5 ATCGCAGACGACTGC... RL2561
Rhizobium sp. NGR234
Position: -75
Score: 19.17
Sequence: GATGCAGACGGCTGC...
Locus tag: NGR_c12200
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -75 19.2 GATGCAGACGGCTGC... NGR_c12200
Rhodopseudomonas palustris CGA009
Position: -132
Score: 35.79
Sequence: ATCGAGGACGACCTC...
Locus tag: RPA2284
Name: ykkc
Funciton: Quaternary ammonium compound-resistance protein sugE
ykkc -132 35.8 ATCGAGGACGACCTC... RPA2284
© 2009-2020 RegPrecise