Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiD gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -227
Score: 74.34
Sequence: GCTCTTCCGAGGGGA...
Locus tag: Atu3286
Name: thiX1
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Atu3287
Name: thiY1
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Atu3288
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Atu3289
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Atu3290
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiX1-thiY1-thiM-thiE-thiD -227 74.3 GCTCTTCCGAGGGGA... Atu3286
Azorhizobium caulinodans ORS 571
Position: -144
Score: 46.84
Sequence: CCATCTCGTCGGGGT...
Locus tag: AZC_1826
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiD -144 46.8 CCATCTCGTCGGGGT... AZC_1826
Brucella melitensis 16M
Position: -153
Score: 77.74
Sequence: AAAATTCGTTGGGGT...
Locus tag: BMEI1732
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: BMEI1733
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: BMEI1734
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: BMEI1735
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: BMEI1736
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: BMEI1737
Name: thiY1
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: BMEI1738
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: BMEI1739
Name: thiX1
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiD-thiO-thiS-thiG-thiE-thiY1-tenA-thiX1 -153 77.7 AAAATTCGTTGGGGT... BMEI1732
Mesorhizobium loti MAFF303099
Position: -197
Score: 70.85
Sequence: ATGCATTCACCAGGG...
Locus tag: mll5795
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: mll5793
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: msl5792
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: mll5790
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: mll5789
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: mll5788
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiC-thiO-thiS-thiG-thiE-thiD -197 70.8 ATGCATTCACCAGGG... mll5795
Mesorhizobium sp. BNC1
Position: -222
Score: 78.89
Sequence: ACCATCACCAGGGGG...
Locus tag: Meso_2561
Name: null
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Meso_2562
Name: null
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Meso_2563
Name: null
Funciton: Sulfur carrier protein ThiS
Locus tag: Meso_2564
Name: null
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Meso_2565
Name: null
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Meso_2566
Name: null
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Meso_2561-Meso_2562-Meso_2563-Meso_2564-Meso_2565-Meso_2566 -222 78.9 ACCATCACCAGGGGG... Meso_2561
Rhizobium leguminosarum bv. viciae 3841
Position: -148
Score: 56.24
Sequence: CGATGAGAGACAGGG...
Locus tag: pRL110443
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: pRL110442
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: pRL110441
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-thiD -148 56.2 CGATGAGAGACAGGG... pRL110443
Rhizobium sp. NGR234
Position: -162
Score: 68.26
Sequence: CCTCCATTCCGAGGG...
Locus tag: NGR_b18410
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiD -162 68.3 CCTCCATTCCGAGGG... NGR_b18410
Sinorhizobium meliloti 1021
Position: -232
Score: 74.99
Sequence: AGCGCATTCCGAGGG...
Locus tag: SMb20962
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiD -232 75 AGCGCATTCCGAGGG... SMb20962
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