Orthologous regulated operons containing thiD gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -227
Score: 74.34 Sequence: GCTCTTCCGAGGGGA...
Locus tag: Atu3286
Name: thiX1 Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Atu3287
Name: thiY1 Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Atu3288
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Atu3289
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Atu3290
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiX1-thiY1-thiM-thiE-thiD | -227 | 74.3 | GCTCTTCCGAGGGGA... | Atu3286 |
| Azorhizobium caulinodans ORS 571 | ||||
|
Position: -144
Score: 46.84 Sequence: CCATCTCGTCGGGGT...
Locus tag: AZC_1826
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiD | -144 | 46.8 | CCATCTCGTCGGGGT... | AZC_1826 |
| Brucella melitensis 16M | ||||
|
Position: -153
Score: 77.74 Sequence: AAAATTCGTTGGGGT...
Locus tag: BMEI1732
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: BMEI1733
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: BMEI1734
Name: thiS Funciton: Thiamine biosynthesis protein ThiS
Locus tag: BMEI1735
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: BMEI1736
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: BMEI1737
Name: thiY1 Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: BMEI1738
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: BMEI1739
Name: thiX1 Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
||||
| thiD-thiO-thiS-thiG-thiE-thiY1-tenA-thiX1 | -153 | 77.7 | AAAATTCGTTGGGGT... | BMEI1732 |
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -197
Score: 70.85 Sequence: ATGCATTCACCAGGG...
Locus tag: mll5795
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: mll5793
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: msl5792
Name: thiS Funciton: Thiamine biosynthesis protein ThiS
Locus tag: mll5790
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: mll5789
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: mll5788
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiC-thiO-thiS-thiG-thiE-thiD | -197 | 70.8 | ATGCATTCACCAGGG... | mll5795 |
| Mesorhizobium sp. BNC1 | ||||
|
Position: -222
Score: 78.89 Sequence: ACCATCACCAGGGGG...
Locus tag: Meso_2561
Name: null Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Meso_2562
Name: null Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Meso_2563
Name: null Funciton: Sulfur carrier protein ThiS
Locus tag: Meso_2564
Name: null Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Meso_2565
Name: null Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Meso_2566
Name: null Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| Meso_2561-Meso_2562-Meso_2563-Meso_2564-Meso_2565-Meso_2566 | -222 | 78.9 | ACCATCACCAGGGGG... | Meso_2561 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -148
Score: 56.24 Sequence: CGATGAGAGACAGGG...
Locus tag: pRL110443
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: pRL110442
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: pRL110441
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiM-thiE-thiD | -148 | 56.2 | CGATGAGAGACAGGG... | pRL110443 |
| Rhizobium sp. NGR234 | ||||
|
Position: -162
Score: 68.26 Sequence: CCTCCATTCCGAGGG...
Locus tag: NGR_b18410
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiD | -162 | 68.3 | CCTCCATTCCGAGGG... | NGR_b18410 |
| Sinorhizobium meliloti 1021 | ||||
|
Position: -232
Score: 74.99 Sequence: AGCGCATTCCGAGGG...
Locus tag: SMb20962
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiD | -232 | 75 | AGCGCATTCCGAGGG... | SMb20962 |