Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvH gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -240
Score: 58.85
Sequence: CGCATCATCGTTGGG...
Position: -155
Score: 41.32
Sequence: ACGACGGAACTCTGG...
Locus tag: Atu1464
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Atu1463
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Atu1462
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -240 58.8 CGCATCATCGTTGGG... Atu1464
-155 41.3 ACGACGGAACTCTGG...
Azorhizobium caulinodans ORS 571
Position: -318
Score: 50.66
Sequence: TGATCCCTGCGGGAG...
Position: -213
Score: 32.04
Sequence: CTCTGGAAAGCAGTC...
Locus tag: AZC_4245
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: AZC_4246
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: AZC_4247
Name: NGR_b19840
Funciton: OsmC/Ohr family protein
Locus tag: AZC_4248
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: AZC_4249
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-NGR_b19840-gcvP1-gcvP2 -318 50.7 TGATCCCTGCGGGAG... AZC_4245
-213 32 CTCTGGAAAGCAGTC...
Bartonella quintana str. Toulouse
Position: -243
Score: 15.79
Sequence: ATCGGAATATATTGG...
Position: -137
Score: 26.74
Sequence: AAGGCAGATCTGGAA...
Locus tag: BQ10130
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BQ10120
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: BQ10110
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -243 15.8 ATCGGAATATATTGG... BQ10130
-137 26.7 AAGGCAGATCTGGAA...
Bradyrhizobium japonicum USDA 110
Position: -233
Score: 55.53
Sequence: ACGGCCACGTCGGGA...
Position: -143
Score: 38.26
Sequence: TGACAGCATCTGGAA...
Locus tag: blr5751
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: blr5752
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: blr5753
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -233 55.5 ACGGCCACGTCGGGA... blr5751
-143 38.3 TGACAGCATCTGGAA...
Bradyrhizobium sp. BTAi1
Position: -257
Score: 48.19
Sequence: CAGTCGCGTCGGGAG...
Position: -147
Score: 35.64
Sequence: CTACTGCATCTGGAA...
Locus tag: BBta_5449
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BBta_5450
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: BBta_5451
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -257 48.2 CAGTCGCGTCGGGAG... BBta_5449
-147 35.6 CTACTGCATCTGGAA...
Brucella melitensis 16M
Position: -231
Score: 48.57
Sequence: GTCTGTTTGCGGGAG...
Position: -148
Score: 49.65
Sequence: AAGACAACTCTGGAA...
Locus tag: BMEII0559
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BMEII0560
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: BMEII0561
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -231 48.6 GTCTGTTTGCGGGAG... BMEII0559
-148 49.7 AAGACAACTCTGGAA...
Mesorhizobium loti MAFF303099
Position: -235
Score: 61.31
Sequence: ACCTGTTTGCGGGAG...
Position: -151
Score: 48.86
Sequence: AAAGACACTCTGGAA...
Locus tag: mlr0883
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: mlr0884
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: mlr0885
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -235 61.3 ACCTGTTTGCGGGAG... mlr0883
-151 48.9 AAAGACACTCTGGAA...
Mesorhizobium sp. BNC1
Position: -232
Score: 53.05
Sequence: CTGCCCGTCCGTGGG...
Position: -149
Score: 48.71
Sequence: GGTTAGACACTCTGG...
Locus tag: Meso_1018
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Meso_1017
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Meso_1016
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -232 53 CTGCCCGTCCGTGGG... Meso_1018
-149 48.7 GGTTAGACACTCTGG...
Nitrobacter winogradskyi Nb-255
Position: -246
Score: 48.3
Sequence: GTTTAGTCGCGCCGG...
Position: -144
Score: 38.76
Sequence: ACTGGTTACATCTGG...
Locus tag: Nwi_1286
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Nwi_1285
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Nwi_1284
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -246 48.3 GTTTAGTCGCGCCGG... Nwi_1286
-144 38.8 ACTGGTTACATCTGG...
Rhizobium etli CFN 42
Position: -249
Score: 53.65
Sequence: CAACCCTGTTGGGAG...
Position: -157
Score: 47.39
Sequence: GACGGAACTCTGGAG...
Locus tag: RHE_CH02241
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RHE_CH02242
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: RHE_CH02243
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -249 53.7 CAACCCTGTTGGGAG... RHE_CH02241
-157 47.4 GACGGAACTCTGGAG...
Rhizobium sp. NGR234
Position: 55
Score: 59.85
Sequence: GACGATCTTGTTGGG...
Position: 142
Score: 46.86
Sequence: CCGGTAGGACTCTGG...
Locus tag: NGR_c15490
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: NGR_c15480
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: NGR_c15470
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP 55 59.8 GACGATCTTGTTGGG... NGR_c15490
142 46.9 CCGGTAGGACTCTGG...
Rhodopseudomonas palustris CGA009
Position: -223
Score: 49.76
Sequence: TAAGTCGCGTCGGGA...
Position: -136
Score: 35.1
Sequence: GACTGACATCTGGAA...
Locus tag: RPA3848
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RPA3849
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: RPA3850
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -223 49.8 TAAGTCGCGTCGGGA... RPA3848
-136 35.1 GACTGACATCTGGAA...
Sinorhizobium meliloti 1021
Position: -231
Score: 54.16
Sequence: TTCGACCTCGTTGGG...
Position: -144
Score: 45.68
Sequence: CCGGTAGGACTCTGG...
Locus tag: SMc02047
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: SMc02048
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: SMc02049
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -231 54.2 TTCGACCTCGTTGGG... SMc02047
-144 45.7 CCGGTAGGACTCTGG...
Xanthobacter autotrophicus Py2
Position: -314
Score: 48.17
Sequence: GACGATCCCTGCGGG...
Position: -216
Score: 38.26
Sequence: AATCTCTGGAAAGCA...
Locus tag: Xaut_2201
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Xaut_2200
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Xaut_2199
Name: NGR_b19840
Funciton: OsmC/Ohr family protein
Locus tag: Xaut_2198
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Xaut_2197
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-NGR_b19840-gcvP1-gcvP2 -314 48.2 GACGATCCCTGCGGG... Xaut_2201
-216 38.3 AATCTCTGGAAAGCA...
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