Orthologous regulated operons containing gcvH gene
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -240
Score: 58.85 Sequence: CGCATCATCGTTGGG...
Position: -155
Score: 41.32 Sequence: ACGACGGAACTCTGG...
Locus tag: Atu1464
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Atu1463
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Atu1462
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -240 | 58.8 | CGCATCATCGTTGGG... | Atu1464 |
| -155 | 41.3 | ACGACGGAACTCTGG... | ||
| Azorhizobium caulinodans ORS 571 | ||||
|
Position: -318
Score: 50.66 Sequence: TGATCCCTGCGGGAG...
Position: -213
Score: 32.04 Sequence: CTCTGGAAAGCAGTC...
Locus tag: AZC_4245
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: AZC_4246
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: AZC_4247
Name: NGR_b19840 Funciton: OsmC/Ohr family protein
Locus tag: AZC_4248
Name: gcvP1 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: AZC_4249
Name: gcvP2 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-NGR_b19840-gcvP1-gcvP2 | -318 | 50.7 | TGATCCCTGCGGGAG... | AZC_4245 |
| -213 | 32 | CTCTGGAAAGCAGTC... | ||
| Bartonella quintana str. Toulouse | ||||
|
Position: -243
Score: 15.79 Sequence: ATCGGAATATATTGG...
Position: -137
Score: 26.74 Sequence: AAGGCAGATCTGGAA...
Locus tag: BQ10130
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BQ10120
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: BQ10110
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
||||
| gcvT-gcvH-gcvP | -243 | 15.8 | ATCGGAATATATTGG... | BQ10130 |
| -137 | 26.7 | AAGGCAGATCTGGAA... | ||
| Bradyrhizobium japonicum USDA 110 | ||||
|
Position: -233
Score: 55.53 Sequence: ACGGCCACGTCGGGA...
Position: -143
Score: 38.26 Sequence: TGACAGCATCTGGAA...
Locus tag: blr5751
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: blr5752
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: blr5753
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -233 | 55.5 | ACGGCCACGTCGGGA... | blr5751 |
| -143 | 38.3 | TGACAGCATCTGGAA... | ||
| Bradyrhizobium sp. BTAi1 | ||||
|
Position: -257
Score: 48.19 Sequence: CAGTCGCGTCGGGAG...
Position: -147
Score: 35.64 Sequence: CTACTGCATCTGGAA...
Locus tag: BBta_5449
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BBta_5450
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: BBta_5451
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -257 | 48.2 | CAGTCGCGTCGGGAG... | BBta_5449 |
| -147 | 35.6 | CTACTGCATCTGGAA... | ||
| Brucella melitensis 16M | ||||
|
Position: -231
Score: 48.57 Sequence: GTCTGTTTGCGGGAG...
Position: -148
Score: 49.65 Sequence: AAGACAACTCTGGAA...
Locus tag: BMEII0559
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BMEII0560
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: BMEII0561
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -231 | 48.6 | GTCTGTTTGCGGGAG... | BMEII0559 |
| -148 | 49.7 | AAGACAACTCTGGAA... | ||
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -235
Score: 61.31 Sequence: ACCTGTTTGCGGGAG...
Position: -151
Score: 48.86 Sequence: AAAGACACTCTGGAA...
Locus tag: mlr0883
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: mlr0884
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: mlr0885
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
||||
| gcvT-gcvH-gcvP | -235 | 61.3 | ACCTGTTTGCGGGAG... | mlr0883 |
| -151 | 48.9 | AAAGACACTCTGGAA... | ||
| Mesorhizobium sp. BNC1 | ||||
|
Position: -232
Score: 53.05 Sequence: CTGCCCGTCCGTGGG...
Position: -149
Score: 48.71 Sequence: GGTTAGACACTCTGG...
Locus tag: Meso_1018
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Meso_1017
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Meso_1016
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -232 | 53 | CTGCCCGTCCGTGGG... | Meso_1018 |
| -149 | 48.7 | GGTTAGACACTCTGG... | ||
| Nitrobacter winogradskyi Nb-255 | ||||
|
Position: -246
Score: 48.3 Sequence: GTTTAGTCGCGCCGG...
Position: -144
Score: 38.76 Sequence: ACTGGTTACATCTGG...
Locus tag: Nwi_1286
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Nwi_1285
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Nwi_1284
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -246 | 48.3 | GTTTAGTCGCGCCGG... | Nwi_1286 |
| -144 | 38.8 | ACTGGTTACATCTGG... | ||
| Rhizobium etli CFN 42 | ||||
|
Position: -249
Score: 53.65 Sequence: CAACCCTGTTGGGAG...
Position: -157
Score: 47.39 Sequence: GACGGAACTCTGGAG...
Locus tag: RHE_CH02241
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RHE_CH02242
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: RHE_CH02243
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -249 | 53.7 | CAACCCTGTTGGGAG... | RHE_CH02241 |
| -157 | 47.4 | GACGGAACTCTGGAG... | ||
| Rhizobium sp. NGR234 | ||||
|
Position: 55
Score: 59.85 Sequence: GACGATCTTGTTGGG...
Position: 142
Score: 46.86 Sequence: CCGGTAGGACTCTGG...
Locus tag: NGR_c15490
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: NGR_c15480
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: NGR_c15470
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | 55 | 59.8 | GACGATCTTGTTGGG... | NGR_c15490 |
| 142 | 46.9 | CCGGTAGGACTCTGG... | ||
| Rhodopseudomonas palustris CGA009 | ||||
|
Position: -223
Score: 49.76 Sequence: TAAGTCGCGTCGGGA...
Position: -136
Score: 35.1 Sequence: GACTGACATCTGGAA...
Locus tag: RPA3848
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RPA3849
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: RPA3850
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -223 | 49.8 | TAAGTCGCGTCGGGA... | RPA3848 |
| -136 | 35.1 | GACTGACATCTGGAA... | ||
| Sinorhizobium meliloti 1021 | ||||
|
Position: -231
Score: 54.16 Sequence: TTCGACCTCGTTGGG...
Position: -144
Score: 45.68 Sequence: CCGGTAGGACTCTGG...
Locus tag: SMc02047
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: SMc02048
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: SMc02049
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) / Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-gcvP | -231 | 54.2 | TTCGACCTCGTTGGG... | SMc02047 |
| -144 | 45.7 | CCGGTAGGACTCTGG... | ||
| Xanthobacter autotrophicus Py2 | ||||
|
Position: -314
Score: 48.17 Sequence: GACGATCCCTGCGGG...
Position: -216
Score: 38.26 Sequence: AATCTCTGGAAAGCA...
Locus tag: Xaut_2201
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Xaut_2200
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Xaut_2199
Name: NGR_b19840 Funciton: OsmC/Ohr family protein
Locus tag: Xaut_2198
Name: gcvP1 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Xaut_2197
Name: gcvP2 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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| gcvT-gcvH-NGR_b19840-gcvP1-gcvP2 | -314 | 48.2 | GACGATCCCTGCGGG... | Xaut_2201 |
| -216 | 38.3 | AATCTCTGGAAAGCA... | ||