Regulons of Clostridium sp. SS2/1
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
5 |
1 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
3 |
3 |
| RNA |
GEMM_RNA_motif |
Cyclic diguanylate |
Second messenger response |
4 |
3 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
2 |
1 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L19_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L20_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
S15 |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
T-box(Asn) |
Asn-tRNA |
Amino acid metabolism |
3 |
1 |
| RNA |
T-box(Cys) |
Cys-tRNA |
Amino acid metabolism |
2 |
1 |
| RNA |
T-box(Ile) |
Ile-tRNA |
Amino acid metabolism |
5 |
1 |
| RNA |
T-box(Leu) |
Leu-tRNA |
Amino acid metabolism |
2 |
1 |
| RNA |
T-box(Phe) |
Phe-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Thr) |
Thr-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Trp) |
Trp-tRNA |
Amino acid metabolism |
3 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
7 |
2 |
| RNA |
glmS |
Glucosamine-6-phosphate |
Amino sugar metabolism |
1 |
1 |
| RNA |
yybP-ykoY |
|
|
3 |
2 |
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Regulated Genes
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Regulatory Sites
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