Regulog PdxW2 - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By TF family - GntR/MocR
By effector - Pyridoxal-5-phosphate
By pathway - Pyridoxine/pyridoxal homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043	3	1
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297
Marinobacter aqueolei
Marinobacter sp. ELB17
Teredinibacter turnerae T7901
Saccharophagus degradans 2-40
Cellvibrio japonicus Ueda107

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
PF00583	Alcanivorax borkumensis SK2	* Chromohalobacter salexigens DSM 3043 Site: position = -94 score = 12.3062 sequence = ACTGGTTCCCC-(13)-ACTGGTTCTTC-(2)-GGGGAACCATT Gene: Csal_1153: GCN5-related N-acetyltransferase domain	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Cellvibrio japonicus Ueda107	GCN5-related N-acetyltransferase domain
PF00583	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043 Gene: Csal_1154: GCN5-related N-acetyltransferase domain	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Cellvibrio japonicus Ueda107	GCN5-related N-acetyltransferase domain
pdxO2	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043 Gene: Csal_1155: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1 Gene: Mmwyl1_0134: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Oceanobacter sp. RED65 Gene: RED65_10849: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Oceanospirillum sp. MED92	Reinekea sp. MED297	Marinobacter aqueolei Gene: Maqu_2930: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Marinobacter sp. ELB17	Teredinibacter turnerae T7901 Gene: TERTU_4601: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Saccharophagus degradans 2-40 Gene: Sde_3707: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Cellvibrio japonicus Ueda107	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PdxW2 - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --