Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Collection of regulogs controlled by Pyridoxal-5-phosphate

Type Phylum Regulog Regulons (studied genomes) Regulatory sites
TF Actinobacteria PdxQ - Frankineae/Propionibacterineae/Pseudonocardiaceae 1 (9) 2
TF Actinobacteria PdxQ - Micrococcineae 4 (14) 8
TF Actinobacteria PdxQ - Mycobacteriaceae 2 (9) 4
TF Actinobacteria PdxQ - Nocardiaceae 1 (4) 3
TF Actinobacteria PdxQ - Streptomycetaceae 4 (4) 8
TF Actinobacteria PdxR - Corynebacteriaceae 3 (8) 3
TF Actinobacteria PdxR - Frankineae/Propionibacterineae/Pseudonocardiaceae 1 (9) 1
TF Actinobacteria PdxR - Micrococcineae 3 (14) 3
TF Actinobacteria PdxR2 - Frankineae/Propionibacterineae/Pseudonocardiaceae 5 (9) 7
TF Actinobacteria PdxR2 - Micrococcineae 2 (14) 4
TF Actinobacteria PdxR2 - Mycobacteriaceae 1 (9) 1
TF Actinobacteria PdxR2 - Nocardiaceae 4 (4) 4
TF Bacteroidetes PdxW - Sphingobacteria 2 (8) 2
TF Deinococcus-Thermus PdxR2 - Deinococcus-Thermus 1 (5) 1
TF Firmicutes GabR - Bacillales 4 (11) 4
TF Firmicutes GabR - Staphylococcaceae 1 (7) 1
TF Firmicutes PdxQ - Clostridia-1 2 (8) 2
TF Firmicutes PdxR - Bacillales 2 (11) 2
TF Firmicutes PdxR - Clostridia-3 14 (14) 21
TF Firmicutes PdxR - Enterococcaceae 2 (2) 5
TF Firmicutes PdxR - Lactobacillaceae 2 (15) 4
TF Firmicutes PdxR - Listeriaceae 4 (4) 8
TF Firmicutes PdxR - Staphylococcaceae 7 (7) 7
TF Firmicutes PdxR - Streptococcaceae 7 (15) 14
TF Firmicutes PdxR - Thermoanaerobacterales 2 (7) 4
TF Firmicutes PdxW - Bacillales 2 (11) 2
TF Proteobacteria/Alpha PdxQ - Rhizobiales 1 (15) 2
TF Proteobacteria/Alpha PdxQ - Rhodobacterales 1 (15) 1
TF Proteobacteria/Alpha PdxQ - Rhodospirillales 1 (9) 1
TF Proteobacteria/Alpha PdxQ2 - Sphingomonadales 2 (7) 4
TF Proteobacteria/Alpha PdxW - Caulobacterales 1 (4) 2
TF Proteobacteria/Alpha PdxW - Rhizobiales 4 (15) 4
TF Proteobacteria/Alpha PdxW - Rhodobacterales 1 (15) 1
TF Proteobacteria/Alpha PdxW - Rhodospirillales 2 (9) 2
TF Proteobacteria/Beta PdxQ - Alcaligenaceae 1 (3) 1
TF Proteobacteria/Beta PdxQ - Comamonadaceae 1 (11) 1
TF Proteobacteria/Beta PdxQ - Ralstonia 2 (6) 2
TF Proteobacteria/Beta PdxR2 - Alcaligenaceae 2 (3) 3
TF Proteobacteria/Beta PdxR2 - Ralstonia 1 (6) 2
TF Proteobacteria/Beta PdxW - Alcaligenaceae 3 (3) 3
TF Proteobacteria/Beta PdxW - Burkholderia 8 (8) 14
TF Proteobacteria/Beta PdxW - Comamonadaceae 2 (11) 2
TF Proteobacteria/Beta PdxW - Ralstonia 2 (6) 3
TF Proteobacteria/Beta PdxW - Various betaproteobacteria 1 (12) 1
TF Proteobacteria/Beta PdxW2 - Burkholderia 6 (8) 6
TF Proteobacteria/Beta PdxW2 - Comamonadaceae 1 (11) 1
TF Proteobacteria/Delta PdxQ - Desulfovibrionales 2 (10) 2
TF Proteobacteria/Delta PdxQ - Desulfuromonadales 1 (9) 1
TF Proteobacteria/Delta PdxW - Desulfuromonadales 1 (9) 2
TF Proteobacteria/Gamma PdxQ - Oceanospirillales/Alteromonadales 1 (12) 1
TF Proteobacteria/Gamma PdxR - Pasteurellales 3 (9) 3
TF Proteobacteria/Gamma PdxR2 - Enterobacteriales 5 (12) 18
TF Proteobacteria/Gamma PdxW - Alteromonadales 2 (9) 2
TF Proteobacteria/Gamma PdxW - Enterobacteriales 2 (12) 2
TF Proteobacteria/Gamma PdxW - Oceanospirillales/Alteromonadales 2 (12) 2
TF Proteobacteria/Gamma PdxW - Shewanellaceae 1 (16) 1
TF Proteobacteria/Gamma PdxW - Vibrionales 6 (10) 6
TF Proteobacteria/Gamma PdxW2 - Moraxellaceae 1 (4) 1
TF Proteobacteria/Gamma PdxW2 - Oceanospirillales/Alteromonadales 1 (12) 1
TF Proteobacteria/Gamma PdxW2 - Pseudomonadaceae 6 (8) 6
TF Proteobacteria/gamma PdxR2 - Xanthomonadales 1 (4) 2
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