Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NrdR - Alcaligenaceae

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bordetella avium 197N 2 1
Bordetella bronchiseptica RB50 2 1
Bordetella petrii DSM 12804 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdA
*
Bordetella avium 197N

Site:
position = -185
score = 5.4927
sequence = TCACTAGAATTAGTGC

Site:
position = -154
score = 5.45314
sequence = ACACTATATATTGTGT

Gene: BAV2982: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Bordetella bronchiseptica RB50

Site:
position = -157
score = 5.30948
sequence = ACACTACATCTTGTGG

Site:
position = -189
score = 5.4927
sequence = TCACTAGAATTAGTGC

Gene: BB4376: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Bordetella petrii DSM 12804

Site:
position = -186
score = 5.4927
sequence = TCACTAGAATTAGTGC

Site:
position = -155
score = 5.56287
sequence = ACACTATATGTAGTGG

Gene: Bpet0583: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
 
Bordetella avium 197N

Gene: BAV2983: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Bordetella bronchiseptica RB50

Gene: BB4377: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Bordetella petrii DSM 12804

Gene: Bpet0582: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise