Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdA gene

Properties
Regulog: NrdR - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alcanivorax borkumensis SK2
Position: -442
Score: 5.4615
Sequence: ACACTATATCTAGTGT
Position: -297
Score: 4.67672
Sequence: CCCCAACATGTTGGGT
Position: -164
Score: 5.07965
Sequence: ACACAACATCTTGTGG
Locus tag: ABO_0711
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: ABO_0710
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -442 5.5 ACACTATATCTAGTGT ABO_0711
-297 4.7 CCCCAACATGTTGGGT
-164 5.1 ACACAACATCTTGTGG
Cellvibrio japonicus Ueda107
Position: -487
Score: 3.60027
Sequence: CCGCATTATCTTGTAG
Position: -456
Score: 4.19034
Sequence: CCCCTAGATATAGGTT
Position: -255
Score: 5.2488
Sequence: CCACTATATCTAGTGG
Locus tag: CJA_1569
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: CJA_1568
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -487 3.6 CCGCATTATCTTGTAG CJA_1569
-456 4.2 CCCCTAGATATAGGTT
-255 5.2 CCACTATATCTAGTGG
Chromohalobacter salexigens DSM 3043
Position: -206
Score: 3.33192
Sequence: CGGCTCTATCTTGTGC
Position: -175
Score: 4.98825
Sequence: CCCCCATATATAGGGA
Locus tag: Csal_0668
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Csal_0667
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -206 3.3 CGGCTCTATCTTGTGC Csal_0668
-175 5 CCCCCATATATAGGGA
Hahella chejuensis KCTC 2396
Position: -385
Score: 4.44349
Sequence: ACGCTACATCTAGTAT
Position: -353
Score: 4.62874
Sequence: AAACCATATATTGTGC
Locus tag: HCH_06929
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: HCH_06928
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -385 4.4 ACGCTACATCTAGTAT HCH_06929
-353 4.6 AAACCATATATTGTGC
Marinobacter aqueolei
Position: -280
Score: 3.7129
Sequence: CGGCCCTATATAGTGA
Position: -248
Score: 4.91571
Sequence: CTACCATATATTGTGA
Locus tag: Maqu_3857
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Maqu_3856
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -280 3.7 CGGCCCTATATAGTGA Maqu_3857
-248 4.9 CTACCATATATTGTGA
Marinobacter sp. ELB17
Position: -415
Score: 3.9672
Sequence: TTCCCGTATATAGTGT
Position: -383
Score: 4.17024
Sequence: ATACCAGATGTAGTGA
Locus tag: MELB17_00905
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MELB17_00910
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -415 4 TTCCCGTATATAGTGT MELB17_00905
-383 4.2 ATACCAGATGTAGTGA
Marinomonas sp. MWYL1
Position: -87
Score: 5.56938
Sequence: ACACTACATATAGTGT
Position: -55
Score: 4.63804
Sequence: ACACTACATACAGTAA
Locus tag: Mmwyl1_2996
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Mmwyl1_2997
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Mmwyl1_2998
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -87 5.6 ACACTACATATAGTGT Mmwyl1_2996
-55 4.6 ACACTACATACAGTAA
Oceanobacter sp. RED65
Position: -202
Score: 5.15662
Sequence: ACACTATATATGGGGT
Position: -170
Score: 4.58808
Sequence: ACCCATTATCTTGTGT
Locus tag: RED65_10534
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: RED65_10539
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: RED65_10544
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -202 5.2 ACACTATATATGGGGT RED65_10534
-170 4.6 ACCCATTATCTTGTGT
Oceanospirillum sp. MED92
Position: -190
Score: 4.91869
Sequence: TCACTATATTTAGTGT
Position: -159
Score: 4.87923
Sequence: GTACTACATATAGTGT
Locus tag: MED92_15538
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MED92_15533
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: MED92_15528
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -190 4.9 TCACTATATTTAGTGT MED92_15538
-159 4.9 GTACTACATATAGTGT
Reinekea sp. MED297
Position: -397
Score: 4.7928
Sequence: ACACAATATATGGTTT
Position: -366
Score: 4.86549
Sequence: GCCCTATATGTTGTGT
Locus tag: MED297_18987
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: MED297_18982
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -397 4.8 ACACAATATATGGTTT MED297_18987
-366 4.9 GCCCTATATGTTGTGT
Saccharophagus degradans 2-40
Position: -451
Score: 3.72806
Sequence: CCGCATTATCTTGTAT
Position: -420
Score: 4.97112
Sequence: CCCCCATATATGGTGT
Position: -188
Score: 5.42675
Sequence: CCACTATATATAGTGG
Locus tag: Sde_2458
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sde_2459
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -451 3.7 CCGCATTATCTTGTAT Sde_2458
-420 5 CCCCCATATATGGTGT
-188 5.4 CCACTATATATAGTGG
Teredinibacter turnerae T7901
Position: -292
Score: 3.72806
Sequence: CCGCATTATCTTGTAT
Position: -261
Score: 4.93832
Sequence: CCCCAATATATGGTGT
Locus tag: TERTU_0730
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: TERTU_0729
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -292 3.7 CCGCATTATCTTGTAT TERTU_0730
-261 4.9 CCCCAATATATGGTGT
© 2009-2020 RegPrecise