Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Bacillus sp. NRRL B-14911

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 5 13
TF BglZ Beta-glucoside Beta-glucosides utilization 1 1
TF CcpA HPr, phosphocarrier protein Carbon catabolism 28 38
TF CcpC Citrate Citrate metabolism 2 2
TF CcpN Gluconeogenesis 2 2
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CitR Citrate metabolism 2 2
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 53 93
TF CsoR Copper ion, (Cu+) Copper resistance 2 2
TF CtsR Heat shock Heat shock response 3 5
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 3 3
TF CzrA Zinc ion, (Zn2+); Silver ion, (Ag+); Nickel ion, (Ni2+); Copper ion, (Cu2+); Cobalt ion, (Co2+); Cadmium, ion (Cd2+) Zinc resistance; Nickel resistance; Copper resistance; Cobalt resistance; Cadmium resistance 1 1
TF ExuR Glucuronate; Galacturonate Glucuronate utilization; Galacturonate utilization 1 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 3 3
TF FapR Malonyl-CoA Fatty acid biosynthesis 4 5
TF Fur Iron ion, (Fe2+) Iron homeostasis 7 14
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 2 3
TF GmuR Glucomannan utilization 1 1
TF HisR Histidine Histidine biosynthesis 1 1
TF HrcA Heat shock Heat shock response 3 3
TF HxlR Formaldehyde Ribulose monophosphate pathway 1 1
TF LexA DNA damage SOS response 7 9
TF LiaR LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin) Cell wall-active antibiotics stress response 1 1
TF LutR L-lactate Lactate utilization 2 2
TF MalR MalK, sensor histidine kinase (malate) Malate utilization 2 15
TF MhqR 2-Methylhydroquinone and catechol resistance 3 3
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NiaR Niacin NAD biosynthesis 3 3
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 2 4
TF OhrR tert-Butyl hydroperoxide; Diamide; Cumene hydroperoxide; Hydrogen peroxide Peroxide stress response 1 1
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 10 21
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 5 5
TF Rex NADH Energy metabolism 2 3
TF RmgR Rhamnogalacturonides utilization 2 3
TF RocR Ornithine; L-citrulline Arginine degradation; Ornithine degradation 1 1
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 21 34
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF XylR Xylose Xylose utilization 3 3
TF YhgD 1 1
TF YodB/CatR Diamide; Quinone Oxidative stress response 2 4
TF YrkD Multidrug resistance 1 1
TF YtcD 2 2
TF YvfU YvfT, sensor histidine kinase Metabolite transport 1 1
TF YybA Polyamine homeostasis 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 5 6