Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing iscS gene

Properties
Regulog: IscR - Clostridia-1
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Firmicutes
Built upon 19 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium beijerincki NCIMB 8052
Position: -105
Score: 5.67628
Sequence: CAAAAGCCGAGTATTTTGGTAAGATATAA
Locus tag: Cbei_1097
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: Cbei_1098
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Cbei_1099
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: Cbei_1100
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU -105 5.7 CAAAAGCCGAGTATTTTGGTAAGATATAA Cbei_1097
Clostridium botulinum A str. ATCC 3502
Position: -82
Score: 4.78731
Sequence: ATATTGTTGACAGGTTTAGTCTGATTTGC
Position: -43
Score: 6.02153
Sequence: ATAAATCATAGTAAAGTGGTCAACATTAA
Locus tag: CBO2569
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CBO2568
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CBO2567
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
iscR-iscS-iscU -82 4.8 ATATTGTTGACAGGTTTAGTCTGATTTGC CBO2569
-43 6 ATAAATCATAGTAAAGTGGTCAACATTAA
Clostridium butyricum 5521
Position: -61
Score: 5.25534
Sequence: CAATAGCCGAGTATTTTGATAAGATATAA
Locus tag: CBY_2622
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CBY_2621
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CBY_2620
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CBY_2619
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU -61 5.3 CAATAGCCGAGTATTTTGATAAGATATAA CBY_2622
Clostridium kluyveri DSM 555
Position: -71
Score: 5.76577
Sequence: TTATTGTTGACAAGTTTACTCTGATTTGA
Locus tag: CKL_1317
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CKL_1318
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CKL_1319
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
iscR-iscS-iscU -71 5.8 TTATTGTTGACAAGTTTACTCTGATTTGA CKL_1317
Clostridium novyi NT
Position: -82
Score: 5.91078
Sequence: TTAATGTTGACAAAAACACTCGGATTTGA
Position: -41
Score: 5.60115
Sequence: AGAATTCATAGTATAACACTCGGATTTAA
Locus tag: NT01CX_2284
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: NT01CX_2283
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: NT01CX_2282
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: NT01CX_2281
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU -82 5.9 TTAATGTTGACAAAAACACTCGGATTTGA NT01CX_2284
-41 5.6 AGAATTCATAGTATAACACTCGGATTTAA
Clostridium perfringens ATCC 13124
Position: -80
Score: 5.82798
Sequence: TTATTGTTGACAAATTTACTCGGTTTTGA
Position: -39
Score: 5.03984
Sequence: ATAAAGTACATCGAATTAGTCAGATTTAG
Locus tag: CPF_2040
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CPF_2039
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CPF_2038
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CPF_2037
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU -80 5.8 TTATTGTTGACAAATTTACTCGGTTTTGA CPF_2040
-39 5 ATAAAGTACATCGAATTAGTCAGATTTAG
Clostridium tetani E88
Position: -92
Score: 5.21816
Sequence: TTATAGTTGACAGGAATACTCGGATTTGT
Position: -52
Score: 5.49248
Sequence: TGAAAGTTTAGTAAAGCAGTAGACTTTCA
Locus tag: CTC01049
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CTC01050
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CTC01051
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CTC01052
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR-iscS-iscU-trmU -92 5.2 TTATAGTTGACAGGAATACTCGGATTTGT CTC01049
-52 5.5 TGAAAGTTTAGTAAAGCAGTAGACTTTCA