Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hypY gene

Properties
Regulog: HypR2 - Rhodobacterales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Proline and 4-hydrohyproline utilization
Effector: 4-hydroxyproline
Phylum: Proteobacteria/alpha
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Paracoccus denitrificans PD1222
Position: -50
Score: 4.25769
Sequence: TATAGTATACGAAA
Locus tag: Pden_1184
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Locus tag: Pden_1185
Name: COG2423
Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
hypY-COG2423 -50 4.3 TATAGTATACGAAA Pden_1184
Roseovarius nubinhibens ISM
Position: -165
Score: 5.19986
Sequence: TTTTGTATCCATTA
Locus tag: ISM_08255
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: ISM_08250
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
hypD-hypY -165 5.2 TTTTGTATCCATTA ISM_08255
Silicibacter TM1040
Position: -158
Score: 5.3043
Sequence: TTTTGGATACAAAA
Locus tag: TM1040_3198
Name: hypD
Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: TM1040_3199
Name: hypE
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Locus tag: TM1040_3200
Name: hypO
Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
Locus tag: TM1040_3201
Name: hypY
Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
hypD-hypE-hypO-hypY -158 5.3 TTTTGGATACAAAA TM1040_3198