Orthologous regulated operons containing ribD gene

Properties
Regulator type:	RNA regulatory element
Name:	FMN
RFAM:	RF00050
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium bartlettii DSM 16795
Position: -253 Score: 120.74 Sequence: GATTATTCTTCGGGG... Locus tag: CLOBAR_00909 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: CLOBAR_00908 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) Locus tag: CLOBAR_00907 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: CLOBAR_00906 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH	-253	120.7	GATTATTCTTCGGGG...	CLOBAR_00909
Clostridium difficile 630
Position: -254 Score: 118.75 Sequence: ACTTAATCTTCGGGG... Locus tag: CD1700 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: CD1699 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) Locus tag: CD1698 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: CD1697 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH	-254	118.8	ACTTAATCTTCGGGG...	CD1700
Clostridium hiranonis DSM 13275
Position: -211 Score: 123.02 Sequence: ACTATCTTCAGGGCA... Locus tag: CLOHIR_00483 Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Locus tag: CLOHIR_00484 Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) Locus tag: CLOHIR_00485 Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Locus tag: CLOHIR_00486 Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH	-211	123	ACTATCTTCAGGGCA...	CLOHIR_00483