Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing uxuL gene

Properties
Regulog: GulR - Ralstonia
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Glucuronate utilization; Galacturonate utilization; Galactarate utilization; Glucarate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 6 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Ralstonia pickettii 12J
Position: -341
Score: 6.23245
Sequence: ATCGATTCAAAAACGGTATGGAT
Position: -106
Score: 6.42004
Sequence: ATCAATACAAGTTCTGTATTAAT
Locus tag: Rpic_4452
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: Rpic_4451
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: Rpic_4450
Name: gudP
Funciton: D-glucarate permease / D-galactarate permease
Locus tag: Rpic_4449
Name: gudD2
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: Rpic_4448
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Rpic_4447
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Rpic_4446
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Rpic_4445
Name: exuT2
Funciton: Hexuronate transporter
kdgD-kgsD-gudP-gudD2-garD-udh-uxuL-exuT2 -341 6.2 ATCGATTCAAAAACGGTATGGAT Rpic_4452
-106 6.4 ATCAATACAAGTTCTGTATTAAT
Ralstonia solanacearum GMI1000
Position: -109
Score: 6.37213
Sequence: ATCGATTCAAAAAATGAATTGAT
Locus tag: RS05369
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: RS05368
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: RSp0828
Name: gudP
Funciton: D-glucarate permease / D-galactarate permease
Locus tag: RSp0829
Name: gudD2
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: RSp0830
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: RS05364
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: RS05363
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: RSp0833
Name: pgl
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: RSp0834
Name: exuT2
Funciton: Hexuronate transporter
kdgD-kgsD-gudP-gudD2-garD-udh-uxuL-pgl-exuT2 -109 6.4 ATCGATTCAAAAAATGAATTGAT RS05369