Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing garD gene

Properties
Regulog: GulR - Rhizobiales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Glucarate utilization; Galactarate utilization
Effector:
Phylum: Proteobacteria/Alpha
Built upon 13 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -70
Score: 5.4118
Sequence: ACTGATCCCAAAAACGCATCGAT
Locus tag: AZC_2638
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: AZC_2637
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: AZC_2636
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
kdgD-kgsD-garD -70 5.4 ACTGATCCCAAAAACGCATCGAT AZC_2638
Bradyrhizobium japonicum USDA 110
Position: -128
Score: 5.35737
Sequence: ATTGATGCTGATTTCGCATCGGT
Locus tag: blr5871
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: blr5872
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: blr5873
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: blr5874
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
kdgD-gudD-kgsD-garD -128 5.4 ATTGATGCTGATTTCGCATCGGT blr5871
Bradyrhizobium sp. BTAi1
Position: -141
Score: 5.22867
Sequence: ATTGATACCGACCCAGCATCAAT
Locus tag: BBta_6487
Name: kdgD
Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Locus tag: BBta_6488
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: BBta_6489
Name: kgsD
Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
Locus tag: BBta_6490
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
kdgD-gudD-kgsD-garD -141 5.2 ATTGATACCGACCCAGCATCAAT BBta_6487