Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing tctC1 gene

Properties
Regulog: GguR - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucarate utilization; Galactarate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -109
Score: 4.90804
Sequence: CAGTCATACGATGACAG
Locus tag: RALTA_B0133
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: RALTA_B0134
Name: tctC2
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: RALTA_B0135
Name: tctC1
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
gudD-tctC2-tctC1 -109 4.9 CAGTCATACGATGACAG RALTA_B0133
Ralstonia eutropha H16
Position: -90
Score: 4.90804
Sequence: CAGTCATACGATGACAG
Locus tag: H16_B0127
Name: gudD
Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: H16_B0128
Name: tctC2
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
Locus tag: H16_B0129
Name: tctC1
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
gudD-tctC2-tctC1 -90 4.9 CAGTCATACGATGACAG H16_B0127
Ralstonia eutropha JMP134
Position: -180
Score: 4.99975
Sequence: ATGTCATCAGACAACAG
Position: -45
Score: 4.95514
Sequence: ATGTTGTATGACGACTG
Locus tag: Reut_A1006
Name: tctC1
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
tctC1 -180 5 ATGTCATCAGACAACAG Reut_A1006
-45 5 ATGTTGTATGACGACTG
Ralstonia metallidurans CH34
Position: -161
Score: 5.16604
Sequence: AAGTCATCCGACGACTG
Position: -44
Score: 4.06023
Sequence: TAGTTGTACGACATCCT
Locus tag: Rmet_0971
Name: tctC1
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
tctC1 -161 5.2 AAGTCATCCGACGACTG Rmet_0971
-44 4.1 TAGTTGTACGACATCCT