Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG1028 gene

Properties
Regulog: GguR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 32 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Variovorax paradoxus S110
Position: -39
Score: 5.10689
Sequence: TAGTTGTACGACAACAG
Locus tag: Vapar_1726
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Vapar_1725
Name: uxuL1
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Vapar_1724
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Vapar_1723
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Vapar_1722
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Vapar_1721
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
Locus tag: Vapar_1720
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
Locus tag: Vapar_1719
Name: null
Funciton: hypothetical protein
Locus tag: Vapar_1718
Name: uxuF
Funciton: Predicted uronate lactonase, PF10282 family
Locus tag: Vapar_1717
Name: tctC2
Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
udh-uxuL1-uxuP-uxuQ-uxuM-garD-Vapar_1720-Vapar_1719-uxuF-tctC2 -39 5.1 TAGTTGTACGACAACAG Vapar_1726