Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gabD gene

Properties
Regulog: GabR - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector: Gamma-aminobutyric acid
Phylum: Proteobacteria/Beta
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -172
Score: 8.96806
Sequence: AGTGGCTC-(15)-ATATGGAC-(8)-GGTACCAA
Locus tag: RALTA_A1417
Name: argE
Funciton: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family
Locus tag: RALTA_A1418
Name: ddpA
Funciton: ABC-type peptide transport system, permease component
Locus tag: RALTA_A1419
Name: dppB
Funciton: ABC-type peptide transport system, permease component
Locus tag: RALTA_A1420
Name: dppC
Funciton: ABC-type peptide transport system, periplasmic component
Locus tag: RALTA_A1421
Name: dppD
Funciton: ABC-type peptide transport system, ATP-binding component
Locus tag: RALTA_A1422
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: RALTA_A1423
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
argE-ddpA-dppB-dppC-dppD-gabT-gabD -172 9 AGTGGCTC-(15)-ATATGGAC-(8)-GGTACCAA RALTA_A1417
Ralstonia eutropha H16
Position: -134
Score: 9.71274
Sequence: ATTGGCAC-(15)-AGCGGTAC-(9)-GGGCCAAG
Locus tag: H16_B0981
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: H16_B0982
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -134 9.7 ATTGGCAC-(15)-AGCGGTAC-(9)-GGGCCAAG H16_B0981
Ralstonia pickettii 12J
Position: -102
Score: 12.5272
Sequence: AGTGGTTC-(15)-ATTGGGTC-(10)-GAGCCAAT
Locus tag: Rpic_3721
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Rpic_3722
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -102 12.5 AGTGGTTC-(15)-ATTGGGTC-(10)-GAGCCAAT Rpic_3721
Ralstonia solanacearum GMI1000
Position: -97
Score: 13.1432
Sequence: ATTGGCTC-(15)-ATTGGGTC-(10)-GGGCCAAT
Locus tag: RSc0029
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: RSc0028
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -97 13.1 ATTGGCTC-(15)-ATTGGGTC-(10)-GGGCCAAT RSc0029