Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rsmE gene

Properties
Regulog: HrcA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Built upon 47 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidothermus cellulolyticus 11B
Position: -78
Score: 6.6421
Sequence: CTGGCACTCGACAACCCTGAGTGCCAA
Locus tag: Acel_0783
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Acel_0784
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Acel_0785
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -78 6.6 CTGGCACTCGACAACCCTGAGTGCCAA Acel_0783
Frankia sp. CcI3
Position: -95
Score: 6.82404
Sequence: TTGGCACTCACTGCGGCCGAGTGCCAA
Locus tag: Francci3_1264
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Francci3_1265
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Francci3_1266
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -95 6.8 TTGGCACTCACTGCGGCCGAGTGCCAA Francci3_1264
Frankia sp. EAN1pec
Position: -152
Score: 6.92838
Sequence: TTGGCACTCACGGCGGCCGAGTGCCAG
Locus tag: Franean1_2109
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Franean1_2110
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Franean1_2111
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -152 6.9 TTGGCACTCACGGCGGCCGAGTGCCAG Franean1_2109
Nakamurella multipartita DSM 44233
Position: -57
Score: 6.1037
Sequence: TTGGCAGCCGGAGCGGGCGAGTGCCAA
Locus tag: Namu_1571
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Namu_1572
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Namu_1573
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -57 6.1 TTGGCAGCCGGAGCGGGCGAGTGCCAA Namu_1571
Nocardioides sp. JS614
Position: -73
Score: 6.63343
Sequence: TTGGCACTCAGGACTTTCGAGTGCCAG
Locus tag: Noca_1903
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Noca_1904
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Noca_1905
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -73 6.6 TTGGCACTCAGGACTTTCGAGTGCCAG Noca_1903
Propionibacterium acnes KPA171202
Position: -67
Score: 6.66393
Sequence: GTGGCACTCGGCACCCGAGAGTGCCAA
Locus tag: PPA0915
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: PPA0916
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: PPA0917
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -67 6.7 GTGGCACTCGGCACCCGAGAGTGCCAA PPA0915