Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bkdB gene

Properties
Regulog: LiuR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 134 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -81
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sama_1709
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sama_1710
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sama_1711
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -81 6.2 GTTTACGTTAACGTAATG Sama_1709
Shewanella baltica OS155
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sbal_2222
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sbal_2221
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sbal_2220
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Sbal_2222
Shewanella denitrificans OS217
Position: -83
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sden_1786
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sden_1787
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sden_1788
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -83 6.2 GTTTACGTTAACGTAATG Sden_1786
Shewanella frigidimarina NCIMB 400
Position: -86
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sfri_1935
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sfri_1936
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sfri_1937
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -86 6.2 GTTTACGTTAACGTAATG Sfri_1935
Shewanella halifaxensis HAW-EB4
Position: -92
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Shal_2234
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Shal_2233
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Shal_2232
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -92 6.2 GTTTACGTTAACGTAATG Shal_2234
Shewanella loihica PV-4
Position: -105
Score: 5.65761
Sequence: GTTTACGTTAACGTAACT
Locus tag: Shew_1925
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Shew_1926
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Shew_1927
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -105 5.7 GTTTACGTTAACGTAACT Shew_1925
Shewanella oneidensis MR-1
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: SO_2339
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: SO_2340
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: SO_2341
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG SO_2339
Shewanella pealeana ATCC 700345
Position: -91
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Spea_2246
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Spea_2245
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Spea_2244
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -91 6.2 GTTTACGTTAACGTAATG Spea_2246
Shewanella piezotolerans WP3
Position: -92
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: swp_2606
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: swp_2605
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: swp_2604
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -92 6.2 GTTTACGTTAACGTAATG swp_2606
Shewanella putrefaciens CN-32
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sputcn32_1885
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sputcn32_1886
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sputcn32_1887
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Sputcn32_1885
Shewanella sediminis HAW-EB3
Position: -103
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Ssed_2329
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Ssed_2328
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Ssed_2327
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -103 6.2 GTTTACGTTAACGTAATG Ssed_2329
Shewanella sp ANA-3
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Shewana3_2131
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Shewana3_2130
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Shewana3_2129
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Shewana3_2131
Shewanella sp MR-4
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Shewmr4_2028
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Shewmr4_2027
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Shewmr4_2026
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Shewmr4_2028
Shewanella sp MR-7
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Shewmr7_1947
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Shewmr7_1948
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Shewmr7_1949
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Shewmr7_1947
Shewanella sp W3-18-1
Position: -90
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Sputw3181_2123
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Sputw3181_2122
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Sputw3181_2121
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -90 6.2 GTTTACGTTAACGTAATG Sputw3181_2123
Shewanella woodyi ATCC 51908
Position: -101
Score: 6.17627
Sequence: GTTTACGTTAACGTAATG
Locus tag: Swoo_2278
Name: bkdA1
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, alpha subunit
Locus tag: Swoo_2279
Name: bkdA2
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E1 component, beta subuni
Locus tag: Swoo_2280
Name: bkdB
Funciton: 3-methyl-2-oxobutanoate dehydrogenase complex, E2 component
bkdA1-bkdA2-bkdB -101 6.2 GTTTACGTTAACGTAATG Swoo_2278