Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing colA3 gene

Properties
Regulog: HypR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Phylum: Proteobacteria/gamma
Built upon 96 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -170
Score: 4.48992
Sequence: ATTGTATAAATT
Locus tag: Shal_2840
Name: colA3
Funciton: Microbial collagenase, secreted (EC 3.4.24.3)
colA3 -170 4.5 ATTGTATAAATT Shal_2840
Shewanella loihica PV-4
Position: -159
Score: 4.94466
Sequence: ATTGTATAAAAT
Locus tag: Shew_1685
Name: colA3
Funciton: Microbial collagenase, secreted (EC 3.4.24.3)
colA3 -159 4.9 ATTGTATAAAAT Shew_1685
Shewanella pealeana ATCC 700345
Position: -160
Score: 4.48992
Sequence: ATTGTATAAATT
Locus tag: Spea_2754
Name: colA3
Funciton: Microbial collagenase, secreted (EC 3.4.24.3)
colA3 -160 4.5 ATTGTATAAATT Spea_2754
Shewanella piezotolerans WP3
Position: -359
Score: 4.1801
Sequence: ATTGCATAAATT
Position: -216
Score: 3.39332
Sequence: ATTGGAGTCAAT
Locus tag: swp_3353
Name: colA3
Funciton: Microbial collagenase, secreted (EC 3.4.24.3)
colA3 -359 4.2 ATTGCATAAATT swp_3353
-216 3.4 ATTGGAGTCAAT
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