Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hpd gene

Properties
Regulog: HmgQ - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Tyrosine degradation
Effector: 4-hydroxyphenylpyruvate
Phylum: Proteobacteria/Gamma
Built upon 33 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -140
Score: 5.77571
Sequence: ATCTAATTTTTAGAT
Locus tag: Sama_1569
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sama_1568
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -140 5.8 ATCTAATTTTTAGAT Sama_1569
Shewanella baltica OS155
Position: -150
Score: 5.77571
Sequence: ATCTAATTTTTAGAT
Locus tag: Sbal_2615
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sbal_2616
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -150 5.8 ATCTAATTTTTAGAT Sbal_2615
Shewanella denitrificans OS217
Position: -184
Score: 5.31493
Sequence: ATCTATAAATTTGAT
Locus tag: Sden_2162
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sden_2163
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -184 5.3 ATCTATAAATTTGAT Sden_2162
Shewanella frigidimarina NCIMB 400
Position: -168
Score: 5.58978
Sequence: ATCTAAAAAATAGAT
Locus tag: Sfri_2326
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sfri_2327
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -168 5.6 ATCTAAAAAATAGAT Sfri_2326
Shewanella halifaxensis HAW-EB4
Position: -124
Score: 5.37644
Sequence: ATCTAAAAATTCGAT
Position: -42
Score: 5.10931
Sequence: ATCAATTAAATAGAT
Locus tag: Shal_2409
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Shal_2410
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -124 5.4 ATCTAAAAATTCGAT Shal_2409
-42 5.1 ATCAATTAAATAGAT
Shewanella loihica PV-4
Position: -123
Score: 5.7954
Sequence: ATCTAAAATTTAGAT
Locus tag: Shew_2154
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Shew_2155
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -123 5.8 ATCTAAAATTTAGAT Shew_2154
Shewanella pealeana ATCC 700345
Position: -124
Score: 4.97092
Sequence: ATCTAAAAATATGAT
Locus tag: Spea_1874
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Spea_1873
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -124 5 ATCTAAAAATATGAT Spea_1874
Shewanella piezotolerans WP3
Position: -123
Score: 5.58978
Sequence: ATCTAAAAAATAGAT
Locus tag: swp_2870
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: swp_2871
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -123 5.6 ATCTAAAAAATAGAT swp_2870
Shewanella putrefaciens CN-32
Position: -128
Score: 5.58978
Sequence: ATCTATTTTTTAGAT
Locus tag: Sputcn32_1671
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sputcn32_1670
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -128 5.6 ATCTATTTTTTAGAT Sputcn32_1671
Shewanella sediminis HAW-EB3
Position: -190
Score: 5.39613
Sequence: ATCTAAAATTTCGAT
Locus tag: Ssed_2687
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hpd -190 5.4 ATCTAAAATTTCGAT Ssed_2687
Shewanella sp ANA-3
Position: -150
Score: 5.77571
Sequence: ATCTAATTTTTAGAT
Locus tag: Shewana3_2481
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Shewana3_2482
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -150 5.8 ATCTAATTTTTAGAT Shewana3_2481
Shewanella sp MR-4
Position: -150
Score: 5.77571
Sequence: ATCTAATTTTTAGAT
Locus tag: Shewmr4_2291
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Shewmr4_2292
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -150 5.8 ATCTAATTTTTAGAT Shewmr4_2291
Shewanella sp MR-7
Position: -150
Score: 5.50086
Sequence: ATCAAATTTTTAGAT
Locus tag: Shewmr7_2363
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Shewmr7_2364
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -150 5.5 ATCAAATTTTTAGAT Shewmr7_2363
Shewanella sp W3-18-1
Position: -128
Score: 5.77571
Sequence: ATCTAATTTTTAGAT
Locus tag: Sputw3181_2354
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sputw3181_2355
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA-hpd -128 5.8 ATCTAATTTTTAGAT Sputw3181_2354
Shewanella woodyi ATCC 51908
Position: -265
Score: 4.97092
Sequence: ATCTAATATTTTGTT
Locus tag: Swoo_1932
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hpd -265 5 ATCTAATATTTTGTT Swoo_1932
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