Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3342 gene

Properties
Regulog: GcvA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria/gamma
Built upon 108 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -113
Score: 4.58665
Sequence: ATAATAAAAACTAAT
Locus tag: Sama_2463
Name: SO3342
Funciton: putative membrane protein
SO3342 -113 4.6 ATAATAAAAACTAAT Sama_2463
Shewanella baltica OS155
Position: -97
Score: 5.00321
Sequence: ATTAATTTTTCTAAT
Locus tag: Sbal_3015
Name: SO3342
Funciton: putative membrane protein
SO3342 -97 5 ATTAATTTTTCTAAT Sbal_3015
Shewanella frigidimarina NCIMB 400
Position: -171
Score: 4.29993
Sequence: ATTATTAAAACTATT
Position: -96
Score: 5.01625
Sequence: ATTAGATTAATTAAT
Locus tag: Sfri_0596
Name: SO3342
Funciton: putative membrane protein
SO3342 -171 4.3 ATTATTAAAACTATT Sfri_0596
-96 5 ATTAGATTAATTAAT
Shewanella halifaxensis HAW-EB4
Position: -96
Score: 5.07761
Sequence: ATTAGAAAATATAAT
Locus tag: Shal_1186
Name: SO3342
Funciton: putative membrane protein
SO3342 -96 5.1 ATTAGAAAATATAAT Shal_1186
Shewanella loihica PV-4
Position: -97
Score: 5.07761
Sequence: ATTAAAAAATCTAAT
Locus tag: Shew_1154
Name: SO3342
Funciton: putative membrane protein
SO3342 -97 5.1 ATTAAAAAATCTAAT Shew_1154
Shewanella oneidensis MR-1
Position: -99
Score: 5.07761
Sequence: ATTATATATTCTAAT
Locus tag: SO_3342
Name: SO3342
Funciton: putative membrane protein
SO3342 -99 5.1 ATTATATATTCTAAT SO_3342
Shewanella pealeana ATCC 700345
Position: -96
Score: 5.07761
Sequence: ATTAGAAAATGTAAT
Locus tag: Spea_1141
Name: SO3342
Funciton: putative membrane protein
SO3342 -96 5.1 ATTAGAAAATGTAAT Spea_1141
Shewanella piezotolerans WP3
Position: -95
Score: 5.00321
Sequence: ATTAGTTTTTTTAAT
Locus tag: swp_1289
Name: SO3342
Funciton: putative membrane protein
SO3342 -95 5 ATTAGTTTTTTTAAT swp_1289
Shewanella putrefaciens CN-32
Position: -85
Score: 5.00321
Sequence: ATTATTTTTTCTAAT
Locus tag: Sputcn32_2677
Name: SO3342
Funciton: putative membrane protein
SO3342 -85 5 ATTATTTTTTCTAAT Sputcn32_2677
Shewanella sediminis HAW-EB3
Position: -97
Score: 5.07761
Sequence: ATTAAAATATCTAAT
Locus tag: Ssed_1246
Name: SO3342
Funciton: putative membrane protein
SO3342 -97 5.1 ATTAAAATATCTAAT Ssed_1246
Shewanella sp ANA-3
Position: -99
Score: 4.8389
Sequence: ATGAAATATTCTAAT
Position: -77
Score: 4.22307
Sequence: TTTAAATAATCTCAT
Locus tag: Shewana3_1204
Name: SO3342
Funciton: putative membrane protein
SO3342 -99 4.8 ATGAAATATTCTAAT Shewana3_1204
-77 4.2 TTTAAATAATCTCAT
Shewanella sp MR-4
Position: -99
Score: 5.07761
Sequence: ATTAAATATTCTAAT
Position: -77
Score: 4.22307
Sequence: TTTAAATAATCTCAT
Locus tag: Shewmr4_1203
Name: SO3342
Funciton: putative membrane protein
SO3342 -99 5.1 ATTAAATATTCTAAT Shewmr4_1203
-77 4.2 TTTAAATAATCTCAT
Shewanella sp MR-7
Position: -99
Score: 5.07761
Sequence: ATTAAATATTCTAAT
Position: -77
Score: 4.22307
Sequence: TTTAAATAATCTCAT
Locus tag: Shewmr7_1274
Name: SO3342
Funciton: putative membrane protein
SO3342 -99 5.1 ATTAAATATTCTAAT Shewmr7_1274
-77 4.2 TTTAAATAATCTCAT
Shewanella sp W3-18-1
Position: -85
Score: 5.00321
Sequence: ATTATTTTTTCTAAT
Locus tag: Sputw3181_1334
Name: SO3342
Funciton: putative membrane protein
SO3342 -85 5 ATTATTTTTTCTAAT Sputw3181_1334
Shewanella woodyi ATCC 51908
Position: -173
Score: 4.57734
Sequence: ATTAGCTAAACTAAA
Position: -98
Score: 5.63208
Sequence: ATTAGAAAAACTAAT
Locus tag: Swoo_1346
Name: SO3342
Funciton: putative membrane protein
SO3342 -173 4.6 ATTAGCTAAACTAAA Swoo_1346
-98 5.6 ATTAGAAAAACTAAT
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