Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing algL1 gene

Properties
Regulog: AlgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Alginate utilization
Effector: Glucuronate; Galacturonate
Phylum: Proteobacteria/gamma
Built upon 2 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella frigidimarina NCIMB 400
Position: -673
Score: 5.58445
Sequence: TAATTGGTAAAACAATTT
Locus tag: Sfri_3103
Name: algL1
Funciton: Alginate lyase precursor (EC 4.2.2.3)
Locus tag: Sfri_3104
Name: algL2
Funciton: poly(beta-D-mannuronate) lyase (EC 4.2.2.3)
Locus tag: Sfri_3105
Name: kdgF
Funciton: Pectin degradation protein KdgF
Locus tag: Sfri_3106
Name: algT
Funciton: Predicted mannuronate transporter
Locus tag: Sfri_3107
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
algL1-algL2-kdgF-algT-kdgK -673 5.6 TAATTGGTAAAACAATTT Sfri_3103
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