Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF02589 gene

Properties
Regulog: ExuR - Clostridia-1
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galacturonate utilization
Effector: Galacturonate
Phylum: Firmicutes
Built upon 20 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -195
Score: 5.6835
Sequence: CTTTGTTAACGTTAACGTAA
Position: -72
Score: 5.71832
Sequence: TATTGATAACGTGAACACTA
Locus tag: CAC0359
Name: rhiN
Funciton: Rhamnogalacturonides degradation protein RhiN
Locus tag: CAC0358
Name: PF01522
Funciton: Polysaccharide deacetylase
Locus tag: CAC0357
Name: rhiT
Funciton: Putative rhamnogalacturonide transporter
Locus tag: CAC0356
Name: PF02589
Funciton: Domain of unknown function DUF162
Locus tag: CAC0355
Name: pgl
Funciton: Polygalacturonase (EC 3.2.1.15)
rhiN-PF01522-rhiT-PF02589-pgl -195 5.7 CTTTGTTAACGTTAACGTAA CAC0359
-72 5.7 TATTGATAACGTGAACACTA
Clostridium butyricum 5521
Position: -197
Score: 4.4807
Sequence: TTTGGAAAACGTGTTCAATT
Position: -96
Score: 4.9538
Sequence: AAATGTGCACGTGTGCAAAA
Locus tag: CBY_0243
Name: rhiN
Funciton: Rhamnogalacturonides degradation protein RhiN
Locus tag: CBY_0242
Name: PF02589
Funciton: Domain of unknown function DUF162
Locus tag: CBY_0241
Name: PF01522
Funciton: Polysaccharide deacetylase
Locus tag: CBY_0240
Name: rhiT
Funciton: Putative rhamnogalacturonide transporter
Locus tag: CBY_0239
Name: pgl
Funciton: Polygalacturonase (EC 3.2.1.15)
rhiN-PF02589-PF01522-rhiT-pgl -197 4.5 TTTGGAAAACGTGTTCAATT CBY_0243
-96 5 AAATGTGCACGTGTGCAAAA