Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpoH gene

Properties
Regulog: HrcA - Various betaproteobacteria
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/beta
Built upon 22 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azoarcus sp. EbN1
Position: -54
Score: 6.96387
Sequence: TTAGCACTCCAACGCCATGAGTGCTAA
Locus tag: ebA4241
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -54 7 TTAGCACTCCAACGCCATGAGTGCTAA ebA4241
Chromobacterium violaceum ATCC 12472
Position: -58
Score: 6.81209
Sequence: CTAGCACTCTCAATATTCGAGTGCTAA
Locus tag: CV4206
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -58 6.8 CTAGCACTCTCAATATTCGAGTGCTAA CV4206
Dechloromonas aromatica RCB
Position: -61
Score: 7.08157
Sequence: TTAGCACTCTTATGCAGCGAGTGCTAA
Locus tag: Daro_3837
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -61 7.1 TTAGCACTCTTATGCAGCGAGTGCTAA Daro_3837
Laribacter hongkongensis HLHK9
Position: -55
Score: 6.65395
Sequence: TTATCACTCAACCAGGCCGAGTGCTAA
Locus tag: LHK_00231
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -55 6.7 TTATCACTCAACCAGGCCGAGTGCTAA LHK_00231
Methylobacillus flagellatus KT
Position: -55
Score: 6.3191
Sequence: CTAGCACACTCAAACAGTGAGTGCTAG
Locus tag: Mfla_0702
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -55 6.3 CTAGCACACTCAAACAGTGAGTGCTAG Mfla_0702
Methylophilales bacterium HTCC2181
Position: -47
Score: 7.12541
Sequence: TTAGCACTCTATAGGATTGAGTGCTAA
Locus tag: MB2181_02680
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -47 7.1 TTAGCACTCTATAGGATTGAGTGCTAA MB2181_02680
Methylotenera mobilis JLW8
Position: -56
Score: 7.00953
Sequence: CTAGCACTCTCGAACGTAGAGTGCTAA
Locus tag: Mmol_1814
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -56 7 CTAGCACTCTCGAACGTAGAGTGCTAA Mmol_1814
Nitrosomonas europaea ATCC 19718
Position: -85
Score: 6.99508
Sequence: TTAGCACTCATGAACTAAGAGTGCTAG
Locus tag: NE0584
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -85 7 TTAGCACTCATGAACTAAGAGTGCTAG NE0584
Thauera sp. MZ1T
Position: -55
Score: 7.05114
Sequence: TTAGCACTCTCACGCCCCGAGTGCTAA
Locus tag: Tmz1t_1062
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -55 7.1 TTAGCACTCTCACGCCCCGAGTGCTAA Tmz1t_1062
Thiobacillus denitrificans
Position: -52
Score: 6.99845
Sequence: TTAGCACTCCCAATGCGCGAGTGCTAA
Locus tag: Tbd_0345
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -52 7 TTAGCACTCCCAATGCGCGAGTGCTAA Tbd_0345