Orthologous regulated operons containing BT4112 gene

Properties
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum:	Bacteroidetes

Built upon 26 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -126 Score: 9.01777 Sequence: CAAAAAATACCA-(9)-CAGATATTACAC Locus tag: BACCELL_03135 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACCELL_03134 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACCELL_03133 Name: BT4112 Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112	-126	9	CAAAAAATACCA-(9)-CAGATATTACAC	BACCELL_03135
Bacteroides eggerthii DSM 20697
Position: -127 Score: 9.28353 Sequence: CAAAAAGTACCA-(9)-CAAAAATTACAC Locus tag: BACEGG_00870 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACEGG_00869 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACEGG_00868 Name: BT4112 Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112	-127	9.3	CAAAAAGTACCA-(9)-CAAAAATTACAC	BACEGG_00870
Bacteroides ovatus ATCC 8483
Position: -128 Score: 9.53095 Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC Locus tag: BACOVA_04911 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACOVA_04910 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACOVA_04909 Name: BT4112 Funciton: Predicted pectin lyase Locus tag: BACOVA_04908 Name: pemC Funciton: Pectinesterase (EC 3.1.1.11) Locus tag: BACOVA_04907 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04906 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04905 Name: plyC1 Funciton: Pectate lyase C
susC_Rgu-1-susD_Rgu-1-BT4112-pemC-plyC1-plyC1-plyC1	-128	9.5	CAAAAAATACGA-(9)-CAAATATTGCAC	BACOVA_04911
Bacteroides thetaiotaomicron VPI-5482
Position: -127 Score: 9.434 Sequence: CAAAAAATACTA-(9)-CAAATATTACAC Locus tag: BT4114 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BT4113 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BT4112 Name: BT4112 Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112	-127	9.4	CAAAAAATACTA-(9)-CAAATATTACAC	BT4114