Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvH gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Caulobacter crescentus CB15
Position: -260
Score: 62.81
Sequence: CTCGACCCTCGCGGG...
Position: -165
Score: 30.61
Sequence: ACGCTGGAAAGCAGT...
Locus tag: CC3355
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: CC3354
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: CC3353
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: CC3352
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP1-gcvP2 -260 62.8 CTCGACCCTCGCGGG... CC3355
-165 30.6 ACGCTGGAAAGCAGT...
Caulobacter segnis ATCC 21756
Position: -240
Score: 61.31
Sequence: TGACCCTCGCGGGAG...
Position: -145
Score: 34.38
Sequence: GCTGGAAAGAGGCTT...
Locus tag: Cseg_0335
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Cseg_0336
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Cseg_0337
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Cseg_0338
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP1-gcvP2 -240 61.3 TGACCCTCGCGGGAG... Cseg_0335
-145 34.4 GCTGGAAAGAGGCTT...
Caulobacter sp. K31
Position: -245
Score: 50.41
Sequence: CTCGACCCACGCGGG...
Position: -157
Score: 52.5
Sequence: GTTTAGGAACGCTGG...
Locus tag: Caul_4387
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Caul_4386
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Caul_4385
Name: null
Funciton: hypothetical protein
Locus tag: Caul_4384
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Caul_4383
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-Caul_4385-gcvP1-gcvP2 -245 50.4 CTCGACCCACGCGGG... Caul_4387
-157 52.5 GTTTAGGAACGCTGG...
Phenylobacterium zucineum HLK1
Position: -271
Score: 42.36
Sequence: GCCGACTCTCGCGGG...
Position: -173
Score: 40.25
Sequence: GCTGATGAACGCTGG...
Locus tag: PHZ_c0592
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: PHZ_c0591
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: PHZ_c0590
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: PHZ_c0589
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP1-gcvP2 -271 42.4 GCCGACTCTCGCGGG... PHZ_c0592
-173 40.2 GCTGATGAACGCTGG...