Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pubC gene

Properties
Regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Built upon 505 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -232
Score: 6.09494
Sequence: AAATGAGAATGATTTGCATTT
Locus tag: Sbal_2708
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Sbal_2709
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Sbal_2710
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Sbal_2711
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Sbal_2712
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -232 6.1 AAATGAGAATGATTTGCATTT Sbal_2708
Shewanella oneidensis MR-1
Position: -208
Score: 5.70061
Sequence: AGATGAGAACGATTTGCATTT
Locus tag: SO3030
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: SO3031
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: SO3032
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: SO3033
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: SO3034
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -208 5.7 AGATGAGAACGATTTGCATTT SO3030
Shewanella putrefaciens CN-32
Position: -219
Score: 5.95007
Sequence: AAATGATAACGATTTGCATTT
Locus tag: Sputcn32_2411
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Sputcn32_2412
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Sputcn32_2413
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Sputcn32_2414
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Sputcn32_2415
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -219 6 AAATGATAACGATTTGCATTT Sputcn32_2411
Shewanella sp ANA-3
Position: -224
Score: 6.09494
Sequence: AAATGAGAATGATTTGCATTT
Locus tag: Shewana3_1510
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Shewana3_1509
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Shewana3_1508
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Shewana3_1507
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Shewana3_1506
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -224 6.1 AAATGAGAATGATTTGCATTT Shewana3_1510
Shewanella sp MR-4
Position: -222
Score: 5.93961
Sequence: AAATGAGAATGGTTTGCATTT
Locus tag: Shewmr4_1454
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Shewmr4_1453
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Shewmr4_1452
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Shewmr4_1451
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Shewmr4_1450
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -222 5.9 AAATGAGAATGGTTTGCATTT Shewmr4_1454
Shewanella sp MR-7
Position: -223
Score: 5.93961
Sequence: AAATGAGAATGGTTTGCATTT
Locus tag: Shewmr7_1520
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Shewmr7_1519
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Shewmr7_1518
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Shewmr7_1517
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Shewmr7_1516
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -223 5.9 AAATGAGAATGGTTTGCATTT Shewmr7_1520
Shewanella sp W3-18-1
Position: -219
Score: 5.95007
Sequence: AAATGATAACGATTTGCATTT
Locus tag: Sputw3181_1597
Name: pubA
Funciton: Putrescine monooxygenase, PubA
Locus tag: Sputw3181_1596
Name: pubB
Funciton: N-hydroxyputrescine-succinyl CoA transferase, PubB
Locus tag: Sputw3181_1595
Name: pubC
Funciton: NTP-dependent putrebactin synthetase, PubC
Locus tag: Sputw3181_1594
Name: putA
Funciton: TonB-dependent ferric putrebactin siderophore receptor, PutA
Locus tag: Sputw3181_1593
Name: putB
Funciton: Ferric putrebactin reductase, PutB
pubA-pubB-pubC-putA-putB -219 6 AAATGATAACGATTTGCATTT Sputw3181_1597