Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cbiD gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Deinococcus-Thermus
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Deinococcus deserti VCD115
Position: -242
Score: 41.15
Sequence: GGAAGTCCGGTGAGA...
Locus tag: Deide_2p01550
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Deide_2p01560
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Deide_2p01570
Name: cbiE
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Locus tag: Deide_2p01580
Name: cbiXC
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Deide_2p01590
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Deide_2p01600
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Deide_2p01610
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Deide_2p01620
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Deide_2p01630
Name: cbiHJ
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Locus tag: Deide_2p01640
Name: cobW
Funciton: Cobalamin synthesis protein
Locus tag: Deide_2p01650
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Deide_2p01660
Name: bluB
Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: Deide_2p01670
Name: cobN
Funciton: Cobaltochelatase, CobN subunit
Locus tag: Deide_2p01680
Name: chlID
Funciton: Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Locus tag: Deide_2p01690
Name: cbiA
Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: Deide_2p01700
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
btuF-btuR-cbiE-cbiXC-cbiD-cbiL-cbiF-cbiG-cbiHJ-cobW-hoxN-bluB-cobN-chlID-cbiA-cbiB -242 41.2 GGAAGTCCGGTGAGA... Deide_2p01550
Deinococcus geothermalis DSM 11300
Position: -259
Score: 35.03
Sequence: CCGGCTTCTGCTATC...
Locus tag: Dgeo_2363
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Dgeo_2362
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Dgeo_2361
Name: cbiE
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Locus tag: Dgeo_2360
Name: cbiXC
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Dgeo_2359
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Dgeo_2358
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Dgeo_2357
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Dgeo_2356
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Dgeo_2355
Name: cbiHJ
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Locus tag: Dgeo_2354
Name: cobW
Funciton: Cobalamin synthesis protein
Locus tag: Dgeo_2353
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Dgeo_2352
Name: cobN
Funciton: Cobaltochelatase, CobN subunit
Locus tag: Dgeo_2351
Name: null
Funciton: Methyltransferase type 11
Locus tag: Dgeo_2350
Name: chlID
Funciton: Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Locus tag: Dgeo_2349
Name: cbiA
Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: Dgeo_2348
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: Dgeo_2875
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Dgeo_2874
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Dgeo_2873
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Dgeo_2872
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
btuF-btuR-cbiE-cbiXC-cbiD-cbiL-cbiF-cbiG-cbiHJ-cobW-hoxN-cobN-Dgeo_2351-chlID-cbiA-cbiB-cobD-cbiP-cobU-cobT -259 35 CCGGCTTCTGCTATC... Dgeo_2363
Thermus aquaticus Y51MC23
Position: -204
Score: 42.11
Sequence: AAAGGGGGAAGACCG...
Locus tag: TaqDRAFT_5285
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: TaqDRAFT_5284
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: TaqDRAFT_5283
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: TaqDRAFT_5282
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: TaqDRAFT_5281
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: TaqDRAFT_5280
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: TaqDRAFT_5279
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: TaqDRAFT_5278
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: TaqDRAFT_5277
Name: cbiX
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: TaqDRAFT_5276
Name: DUF3209
Funciton: Hypothetical protein implicated in coenzyme B12 biosynthesis
Locus tag: TaqDRAFT_5275
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
hoxN-cbiD-cbiC-cbiET-cbiL-cbiF-cbiH-cbiG-cbiX-DUF3209 -cobA -204 42.1 AAAGGGGGAAGACCG... TaqDRAFT_5285
Thermus thermophilus HB27
Position: -209
Score: 45.89
Sequence: AGGGGGAAGACCGGT...
Locus tag: TTP0007
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: TTP0008
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: TTP0009
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: TTP0010
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: TTP0011
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: TTP0012
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: TTP0013
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: TTP0014
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: TTP0015
Name: cbiX
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: TTP0016
Name: DUF3209
Funciton: Hypothetical protein implicated in coenzyme B12 biosynthesis
Locus tag: TTP0017
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: TTP0018
Name: bluB
Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: TTP0019
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Locus tag: TTP0020
Name: TTP0020
Funciton: HEPN domain-containing nucleotidyltransferase
Locus tag: TTP0021
Name: TTP0021
Funciton: Nucleotidyltransferase
Locus tag: TTP0022
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: TTP0023
Name: cbiP-cobU
Funciton: Cobyric acid synthase / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
hoxN-cbiD-cbiC-cbiET-cbiL-cbiF-cbiH-cbiG-cbiX-DUF3209 -cobA-bluB-cbiB-TTP0020-TTP0021-cobD-cbiP-cobU -209 45.9 AGGGGGAAGACCGGT... TTP0007