Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Chlorobiales
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chlorobium limicola DSM 245
Position: -2702
Score: 98.79
Sequence: TTTTACTGATGAAGC...
Locus tag: Clim_1057
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Clim_1058
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Locus tag: Clim_1059
Name: porB
Funciton: Predicted porin, Gram-negative type
Locus tag: Clim_1060
Name: cbiM
Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Clim_1061
Name: cbiN
Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: Clim_1062
Name: cbiQ
Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: Clim_1063
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
nrdD-nrdG-porB-cbiM-cbiN-cbiQ-cbiO -2702 98.8 TTTTACTGATGAAGC... Clim_1057
Chlorobium phaeobacteroides BS1
Position: -359
Score: 101.75
Sequence: GATTTTTGATAAAGC...
Locus tag: Cphamn1_1191
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Cphamn1_1192
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -359 101.8 GATTTTTGATAAAGC... Cphamn1_1191
Chloroherpeton thalassium ATCC 35110
Position: -133
Score: 18.63
Sequence: GGAAGTCCTGTGAGA...
Locus tag: Ctha_0685
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Ctha_0686
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -133 18.6 GGAAGTCCTGTGAGA... Ctha_0685
Pelodictyon phaeoclathratiforme BU-1
Position: -326
Score: 100.1
Sequence: TTTTTTACTGATGAA...
Locus tag: Ppha_2623
Name: null
Funciton: Hypothetical protein
Locus tag: Ppha_2622
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Ppha_2621
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ppha_2623-nrdD-nrdG -326 100.1 TTTTTTACTGATGAA... Ppha_2623
Prosthecochloris aestuarii DSM 271
Position: -355
Score: 94.09
Sequence: TTGTATTGGGGAAGC...
Locus tag: Paes_0906
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Paes_0907
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -355 94.1 TTGTATTGGGGAAGC... Paes_0906
Prosthecochloris vibrioformis DSM 265
Position: -356
Score: 78.04
Sequence: TTCTTTCATTGTATG...
Locus tag: Cvib_0807
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Cvib_0808
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Locus tag: Cvib_0809
Name: cbiA
Funciton: Cobyrinic acid a,c-diamide synthase CbiA
nrdD-nrdG-cbiA -356 78 TTCTTTCATTGTATG... Cvib_0807