Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cobA gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Chlorobiales
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chlorobaculum parvum NCIB 8327
Position: -616
Score: 91.81
Sequence: ATACTTCATCCGAAC...
Locus tag: Cpar_1485
Name: porB
Funciton: Predicted porin, Gram-negative type
Locus tag: Cpar_1484
Name: cbiM
Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Cpar_1483
Name: cbiN
Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: Cpar_1482
Name: cbiQ
Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: Cpar_1481
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Cpar_1480
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Cpar_1479
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Cpar_1478
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Cpar_1477
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Cpar_1476
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Cpar_1475
Name: cbiGF
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Cpar_1474
Name: cbiJD
Funciton: Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic
porB-cbiM-cbiN-cbiQ-cbiO-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF-cbiJD -616 91.8 ATACTTCATCCGAAC... Cpar_1485
Chlorobium limicola DSM 245
Position: -509
Score: 74.69
Sequence: TCTTTCTCGTCATAA...
Locus tag: Clim_1001
Name: btuB7
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Clim_1002
Name: null
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Clim_1003
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1004
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Clim_1005
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Clim_1006
Name: btuF2
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Clim_1007
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Clim_1008
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Clim_1009
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Clim_1010
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Clim_1011
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Clim_1012
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Clim_1013
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Clim_1014
Name: cbiGF
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
btuB7-Clim_1002-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF -509 74.7 TCTTTCTCGTCATAA... Clim_1001
Chloroherpeton thalassium ATCC 35110
Position: -227
Score: 93.55
Sequence: GTATAATTTCCCTTC...
Locus tag: Ctha_2234
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Ctha_2233
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Ctha_2232
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Ctha_2231
Name: nfo
Funciton: Endonuclease IV (EC 3.1.21.2)
Locus tag: Ctha_2230
Name: cbiM
Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Ctha_2229
Name: cbiN
Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: Ctha_2228
Name: cbiQ
Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: Ctha_2227
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Ctha_2226
Name: yeeZ
Funciton: NAD-dependent epimerase/dehydratase
Locus tag: Ctha_2225
Name: bluB
Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: Ctha_2224
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Ctha_2223
Name: cbiX
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: Ctha_2222
Name: null
Funciton: Hypothetical protein
Locus tag: Ctha_2221
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Ctha_2220
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Ctha_2219
Name: null
Funciton: Prevent-host-death family protein
Locus tag: Ctha_2218
Name: null
Funciton: Conserved hypothetical protein
Locus tag: Ctha_2217
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
btuF-cbiZ-PF00795-nfo-cbiM-cbiN-cbiQ-cbiO-yeeZ-bluB-cobA-cbiX-Ctha_2222-cbiL-cbiHC-Ctha_2219-Ctha_2218-cbiET -227 93.6 GTATAATTTCCCTTC... Ctha_2234
Prosthecochloris aestuarii DSM 271
Position: -518
Score: 81.88
Sequence: TGTTCTTTCGCTTGT...
Locus tag: Paes_1301
Name: btuB7
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Paes_1300
Name: null
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Paes_1299
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1298
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Paes_1297
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Paes_1296
Name: btuF2
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Paes_1295
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Paes_1294
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Paes_1293
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Paes_1292
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Paes_1291
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Paes_1290
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Paes_1289
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Paes_1288
Name: cbiGF
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Paes_1287
Name: cbiJ
Funciton: Precorrin-6x reductase CbiJ (EC 1.3.1.54)
Locus tag: Paes_1286
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
btuB7-Paes_1300-btuF-btuC-btuD-btuF2-cbiZ-PF00795-cobA-cbiK-cbiL-cbiHC-cbiET-cbiGF-cbiJ-cbiD -518 81.9 TGTTCTTTCGCTTGT... Paes_1301