Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuC gene

Properties
Regulog: LiuQ - Burkholderia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 32 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -158
Score: 5.36374
Sequence: CTGAGTATCACTCAA
Position: -56
Score: 5.23039
Sequence: TTGAGCGAAACTCAG
Locus tag: Bamb_4588
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bamb_4587
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bamb_4586
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bamb_4585
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -158 5.4 CTGAGTATCACTCAA Bamb_4588
-56 5.2 TTGAGCGAAACTCAG
Burkholderia glumae BGR1
Position: -172
Score: 5.58227
Sequence: TTGAGTGTCACTCAA
Position: -71
Score: 5.01185
Sequence: CTGAGCAAAACTCAG
Locus tag: bglu_2g11300
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: bglu_2g11290
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: bglu_2g11280
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: bglu_2g11270
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -172 5.6 TTGAGTGTCACTCAA bglu_2g11300
-71 5 CTGAGCAAAACTCAG
Burkholderia mallei ATCC 23344
Position: -155
Score: 5.26551
Sequence: CTGAGTGTTGCTCAA
Position: -55
Score: 5.21909
Sequence: TTGAGCAAGACTCAA
Locus tag: BMAA0802
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: BMAA0803
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: BMAA0804
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: BMAA0805
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -155 5.3 CTGAGTGTTGCTCAA BMAA0802
-55 5.2 TTGAGCAAGACTCAA
Burkholderia phymatum STM815
Position: -210
Score: 5.58227
Sequence: TTGAGTGACACTCAA
Locus tag: Bphy_3562
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bphy_3561
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bphy_3560
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bphy_3559
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -210 5.6 TTGAGTGACACTCAA Bphy_3562
Burkholderia pseudomallei K96243
Position: -155
Score: 5.30739
Sequence: CTGAGTGTCGCTCAA
Position: -55
Score: 5.21909
Sequence: TTGAGCAAGACTCAA
Locus tag: BPSS1448
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: BPSS1447
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: BPSS1446
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: BPSS1445
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -155 5.3 CTGAGTGTCGCTCAA BPSS1448
-55 5.2 TTGAGCAAGACTCAA
Burkholderia sp. 383
Position: -94
Score: 5.40562
Sequence: CTGAGTGTCACTCAA
Position: 7
Score: 5.23039
Sequence: TTGAGCGAAACTCAG
Locus tag: Bcep18194_B0423
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bcep18194_B0424
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bcep18194_B0425
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bcep18194_B0426
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -94 5.4 CTGAGTGTCACTCAA Bcep18194_B0423
7 5.2 TTGAGCGAAACTCAG
Burkholderia vietnamiensis G4
Position: -156
Score: 5.40562
Sequence: CTGAGTGTCACTCAA
Position: -54
Score: 5.23039
Sequence: TTGAGCGAAACTCAG
Locus tag: Bcep1808_3495
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bcep1808_3494
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bcep1808_3493
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bcep1808_3492
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -156 5.4 CTGAGTGTCACTCAA Bcep1808_3495
-54 5.2 TTGAGCGAAACTCAG
Burkholderia xenovorans LB400
Position: -186
Score: 5.36374
Sequence: CTGAGTGATACTCAA
Locus tag: Bxe_B0960
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Bxe_B0961
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Bxe_B0962
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Bxe_B0963
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-liuD -186 5.4 CTGAGTGATACTCAA Bxe_B0960
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