Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Saro_1001 gene

Properties
Regulog: LiuR - Sphingomonadales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Built upon 65 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erythrobacter litoralis HTCC2594
Position: -44
Score: 5.06568
Sequence: CCTAACGTTAGCGTCAAG
Locus tag: ELI_09605
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: ELI_09600
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: ELI_09595
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
acdQ-acdP-ELI_09595 -44 5.1 CCTAACGTTAGCGTCAAG ELI_09605
Erythrobacter sp. NAP1
Position: -61
Score: 4.4757
Sequence: AATGACGATAACGTAAGC
Position: -55
Score: 5.0393
Sequence: GATAACGTAAGCGTCAAC
Locus tag: NAP1_10032
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: NAP1_10027
Name: null
Funciton: GTPases - Sulfate adenylate transferase subunit 1
Locus tag: NAP1_10022
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: NAP1_10017
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
acdQ-NAP1_10027-acdP-NAP1_10017 -61 4.5 AATGACGATAACGTAAGC NAP1_10032
-55 5 GATAACGTAAGCGTCAAC
Novosphingobium aromaticivorans DSM 12444
Position: -168
Score: 5.29234
Sequence: TTTTACGTTTACGTCAGC
Position: -162
Score: 4.274
Sequence: GTTTACGTCAGCTTAGGG
Locus tag: Saro_0999
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: Saro_1000
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: Saro_1001
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
acdQ-acdP-Saro_1001 -168 5.3 TTTTACGTTTACGTCAGC Saro_0999
-162 4.3 GTTTACGTCAGCTTAGGG
Sphingopyxis alaskensis RB2256
Position: -63
Score: 5.48544
Sequence: GTTGACGCTTGCGTAAAG
Locus tag: Sala_3077
Name: acdQ
Funciton: Acyl-CoA dehydrogenases
Locus tag: Sala_3078
Name: acdP
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: Sala_3079
Name: null
Funciton: short-chain dehydrogenase/reductase SDR
acdQ-acdP-Sala_3079 -63 5.5 GTTGACGCTTGCGTAAAG Sala_3077