Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ivdA gene

Properties
Regulog: LiuR - Various betaproteobacteria
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chromobacterium violaceum ATCC 12472
Position: -93
Score: 6.35749
Sequence: CTTGACGTTTACGTCAAC
Position: -87
Score: 5.47325
Sequence: GTTTACGTCAACGTCAAC
Locus tag: CV2087
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: CV2088
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
liuR-ivdA -93 6.4 CTTGACGTTTACGTCAAC CV2087
-87 5.5 GTTTACGTCAACGTCAAC
Dechloromonas aromatica RCB
Position: -51
Score: 6.54321
Sequence: GTTGACGTTAACGTAAAC
Position: -45
Score: 5.4159
Sequence: GTTAACGTAAACGTAAAT
Locus tag: Daro_0101
Name: paaI
Funciton: Phenylacetic acid degradation-related protein
Locus tag: Daro_0100
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Daro_0099
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Daro_0098
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Daro_0097
Name: null
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Daro_0096
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Daro_0095
Name: null
Funciton: Protein of unknown function DUF88
Locus tag: Daro_0094
Name: null
Funciton: 2-hydroxychromene-2-carboxylate isomerase
Locus tag: Daro_0093
Name: null
Funciton: Lysine decarboxylase family
Locus tag: Daro_0092
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Daro_0091
Name: null
Funciton: Transcriptional regulator
Locus tag: Daro_0090
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Daro_0089
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Daro_0088
Name: null
Funciton: 5-enolpyruvylshikimate-3-phosphate synthase
Locus tag: Daro_0087
Name: fabG
Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Locus tag: Daro_0086
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
paaI-liuA-cah-ivdA-Daro_0097-ivdC-Daro_0095-Daro_0094-Daro_0093-liuB-Daro_0091-liuC-liuD-Daro_0088-fabG-liuE -51 6.5 GTTGACGTTAACGTAAAC Daro_0101
-45 5.4 GTTAACGTAAACGTAAAT
Laribacter hongkongensis HLHK9
Position: -116
Score: 5.59504
Sequence: ATATACGTTTACGTTAAC
Position: -110
Score: 5.66139
Sequence: GTTTACGTTAACGTCAAT
Position: -33
Score: 5.10584
Sequence: GTTTCCGTTTACGTAAAA
Locus tag: LHK_00207
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: LHK_00206
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
liuR-ivdA -116 5.6 ATATACGTTTACGTTAAC LHK_00207
-110 5.7 GTTTACGTTAACGTCAAT
-33 5.1 GTTTCCGTTTACGTAAAA
Thauera sp. MZ1T
Position: -59
Score: 5.5039
Sequence: GATTACGTTAACGTTAAC
Locus tag: Tmz1t_0730
Name: paaI
Funciton: Phenylacetic acid degradation-related protein
Locus tag: Tmz1t_0731
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Tmz1t_0732
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Tmz1t_0733
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
paaI-cah-ivdA-ivdC -59 5.5 GATTACGTTAACGTTAAC Tmz1t_0730