Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing etfA gene

Properties
Regulog: LiuR - Alteromonadales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 65 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -96
Score: 5.87488
Sequence: GTTGACGTTTACGTCAAC
Position: -47
Score: 4.98934
Sequence: GTTGACGTACACGTTAGG
Locus tag: ATW7_13178
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: ATW7_13173
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB-etfA -96 5.9 GTTGACGTTTACGTCAAC ATW7_13178
-47 5 GTTGACGTACACGTTAGG
Alteromonas macleodii 'Deep ecotype'
Position: -266
Score: 5.87488
Sequence: GTTGACGTTTACGTCAAC
Position: -228
Score: 6.18477
Sequence: GTTTACGTTAACGTCAAC
Locus tag: MADE_00996
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: MADE_00997
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB-etfA -266 5.9 GTTGACGTTTACGTCAAC MADE_00996
-228 6.2 GTTTACGTTAACGTCAAC
Colwellia psychrerythraea 34H
Position: -83
Score: 5.00218
Sequence: GTTTACGTTGACGTTGAC
Position: -77
Score: 5.67881
Sequence: GTTGACGTTGACGTAAAG
Locus tag: CPS_3687
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CPS_3688
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB-etfA -83 5 GTTTACGTTGACGTTGAC CPS_3687
-77 5.7 GTTGACGTTGACGTAAAG
Pseudoalteromonas atlantica T6c
Position: -32
Score: 5.27622
Sequence: GTTGACGTGTACGTCAAC
Locus tag: Patl_2146
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Patl_2145
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB-etfA -32 5.3 GTTGACGTGTACGTCAAC Patl_2146
Pseudoalteromonas haloplanktis TAC125
Position: -96
Score: 4.80804
Sequence: GTTGATGTTTACGTCAAT
Position: -47
Score: 4.80172
Sequence: GTTGACGTGCACGTCAGC
Locus tag: PSHAa1618
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: PSHAa1617
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
etfB-etfA -96 4.8 GTTGATGTTTACGTCAAT PSHAa1618
-47 4.8 GTTGACGTGCACGTCAGC