Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuB gene

Properties
Regulog: LiuR - Vibrionales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 38 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -203
Score: 5.67144
Sequence: CTTGACGTTTACGTAAGC
Position: -174
Score: 5.92222
Sequence: ATTTACGTAAACGTAAAG
Locus tag: PBPRB1113
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: PBPRB1114
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PBPRB1115
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PBPRB1116
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PBPRB1117
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PBPRB1118
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PBPRB1119
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuB-liuC-liuC-liuE -203 5.7 CTTGACGTTTACGTAAGC PBPRB1113
-174 5.9 ATTTACGTAAACGTAAAG
Vibrio angustum S14
Position: -115
Score: 5.39907
Sequence: ATTTACGTAAACGTTAAG
Locus tag: VAS14_10939
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: VAS14_10934
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: VAS14_10929
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: VAS14_10924
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: VAS14_10919
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuC-liuE -115 5.4 ATTTACGTAAACGTTAAG VAS14_10939
Vibrio harveyi ATCC BAA-1116
Position: -170
Score: 5.67144
Sequence: CTTGACGTTTACGTAAGC
Position: -141
Score: 5.92222
Sequence: ATTTACGTAAACGTAAAG
Locus tag: VIBHAR_05481
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: VIBHAR_05480
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: VIBHAR_05479
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: VIBHAR_05478
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: VIBHAR_05477
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuC-liuE -170 5.7 CTTGACGTTTACGTAAGC VIBHAR_05481
-141 5.9 ATTTACGTAAACGTAAAG
Vibrio parahaemolyticus RIMD 2210633
Position: -195
Score: 5.07331
Sequence: GTTGACGTTTACGTCATA
Position: -166
Score: 5.7845
Sequence: ATTTACGTTAACGTCAAG
Position: -66
Score: 5.35481
Sequence: GTTTACTTTAACGTTAAC
Locus tag: VPA1124
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: VPA1125
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: VPA1126
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: VPA1127
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: VPA1128
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: VPA1129
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuC-liuD-liuE -195 5.1 GTTGACGTTTACGTCATA VPA1124
-166 5.8 ATTTACGTTAACGTCAAG
-66 5.4 GTTTACTTTAACGTTAAC
Vibrio shilonii AK1
Position: -155
Score: 5.92222
Sequence: ATTTACGTAAACGTAAAG
Locus tag: VSAK1_15262
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: VSAK1_15267
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: VSAK1_15272
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: VSAK1_15277
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: VSAK1_15282
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuC-liuE -155 5.9 ATTTACGTAAACGTAAAG VSAK1_15262
Vibrio vulnificus CMCP6
Position: -141
Score: 5.67144
Sequence: CTTGACGTTTACGTAAGC
Position: -112
Score: 5.92222
Sequence: ATTTACGTAAACGTAAAG
Locus tag: VV20495
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: VV20496
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: VV20497
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: VV20498
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: VV20499
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Locus tag: VV20500
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuR-liuA-liuB-liuC-liuE-liuE -141 5.7 CTTGACGTTTACGTAAGC VV20495
-112 5.9 ATTTACGTAAACGTAAAG
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