Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing araD gene

Properties
Regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Built upon 559 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -32
Score: 4.38667
Sequence: ATGCAAGCGCTTTATT
Locus tag: RBAM_025860
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: RBAM_025850
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: RBAM_025840
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: RBAM_025830
Name: araL
Funciton: Arabinose operon protein AraL
Locus tag: RBAM_025820
Name: araM
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
Locus tag: RBAM_025810
Name: araN
Funciton: Alpha-arabinosides ABC transport system, substrate-binding protein
Locus tag: RBAM_025800
Name: araP
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: RBAM_025790
Name: araQ
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: RBAM_025780
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
araA-araB-araD-araL-araM-araN-araP-araQ-abfA -32 4.4 ATGCAAGCGCTTTATT RBAM_025860
Bacillus clausii KSM-K16
Position: -136
Score: 4.89573
Sequence: TTGGAAGCGCTTTAAT
Locus tag: ABC0404
Name: araL
Funciton: Arabinose operon protein AraL
Locus tag: ABC0405
Name: araM
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
Locus tag: ABC0406
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: ABC0407
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: ABC0408
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araL-araM-araD-araB-araA -136 4.9 TTGGAAGCGCTTTAAT ABC0404
Bacillus licheniformis DSM 13
Position: -55
Score: 4.09963
Sequence: AGGAAAATGCTTTCTT
Position: -29
Score: 4.50276
Sequence: ATGAAATCGCTATCAG
Locus tag: BLi02062
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BLi02063
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araD -55 4.1 AGGAAAATGCTTTCTT BLi02062
-29 4.5 ATGAAATCGCTATCAG
Bacillus pumilus SAFR-032
Position: -35
Score: 5.04805
Sequence: TTGAAACCGCTATCAA
Locus tag: BPUM_2329
Name: null
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BPUM_2328
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BPUM_2327
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
BPUM_2329-araD-araA -35 5 TTGAAACCGCTATCAA BPUM_2329
Bacillus subtilis subsp. subtilis str. 168
Position: -38
Score: 4.99515
Sequence: TTGAAAGCGTTTTATT
Locus tag: BSU28800
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BSU28790
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BSU28780
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BSU28770
Name: araL
Funciton: Arabinose operon protein AraL
Locus tag: BSU28760
Name: araM
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
Locus tag: BSU28750
Name: araN
Funciton: Alpha-arabinosides ABC transport system, substrate-binding protein
Locus tag: BSU28740
Name: araP
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: BSU28730
Name: araQ
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: BSU28720
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
araA-araB-araD-araL-araM-araN-araP-araQ-abfA -38 5 TTGAAAGCGTTTTATT BSU28800
Oceanobacillus iheyensis HTE831
Position: -59
Score: 4.26712
Sequence: AAGAAAGCGTATCCTT
Position: -29
Score: 4.39733
Sequence: ATGTAGGCGTTTTCAG
Locus tag: OB2799
Name: araK
Funciton: Ribulokinase (EC 2.7.1.16)/xylulokinase
Locus tag: OB2798
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: OB2797
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araK-araD-araA -59 4.3 AAGAAAGCGTATCCTT OB2799
-29 4.4 ATGTAGGCGTTTTCAG
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