Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ruvA gene

Properties
Regulog: LexA - Rhizobiales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/alpha
Built upon 212 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -58
Score: 5.04903
Sequence: GTTGTCGTTTTGTTC
Locus tag: Atu3724
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Atu3723
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Atu3722
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -58 5 GTTGTCGTTTTGTTC Atu3724
Bradyrhizobium japonicum USDA 110
Position: -47
Score: 4.64758
Sequence: GTTCTGTTTCTGTTT
Locus tag: blr1535
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: blr1536
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: blr1537
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -47 4.6 GTTCTGTTTCTGTTT blr1535
Bradyrhizobium sp. BTAi1
Position: -47
Score: 4.63003
Sequence: GTTCCGTTTATGTTT
Locus tag: BBta_6909
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: BBta_6908
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BBta_6907
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: BBta_6906
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-cdd-ruvB -47 4.6 GTTCCGTTTATGTTT BBta_6909
Brucella melitensis 16M
Position: -60
Score: 5.07514
Sequence: GTTTCTCTTTTGTTC
Locus tag: BMEI0332
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: BMEI0333
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BMEI0334
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -60 5.1 GTTTCTCTTTTGTTC BMEI0332
Rhodopseudomonas palustris CGA009
Position: -44
Score: 4.4693
Sequence: GTTGCTATTTTGTTC
Locus tag: RPA1099
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RPA1100
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: RPA1101
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RPA1102
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-cdd-ruvB -44 4.5 GTTGCTATTTTGTTC RPA1099
Sinorhizobium meliloti 1021
Position: -58
Score: 5.40566
Sequence: GTTTTTGTTTTGTTC
Locus tag: SMc03967
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SMc03966
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: SMc03965
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -58 5.4 GTTTTTGTTTTGTTC SMc03967