Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yjbJ gene

Properties
Regulog: LexA - Comamonadaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/beta
Built upon 71 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -52
Score: 4.08323
Sequence: GGCTGTCTTTCCATCCAGTA
Locus tag: Aave_1340
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Aave_1341
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: Aave_1342
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE-yjbJ-parC -52 4.1 GGCTGTCTTTCCATCCAGTA Aave_1340
Acidovorax sp. JS42
Position: -35
Score: 4.52777
Sequence: TCCTGGTTTTATATCCAGCA
Locus tag: Ajs_1014
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Ajs_1015
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: Ajs_1016
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE-yjbJ-parC -35 4.5 TCCTGGTTTTATATCCAGCA Ajs_1014
Comamonas testosteroni KF-1
Position: -52
Score: 4.38915
Sequence: AACTGTGAATTTATCCAGCT
Locus tag: CtesDRAFT_5182
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: CtesDRAFT_5183
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: CtesDRAFT_5184
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE-yjbJ-parC -52 4.4 AACTGTGAATTTATCCAGCT CtesDRAFT_5182
Polaromonas naphthalenivorans CJ2
Position: -64
Score: 5.44231
Sequence: AACTGTATGTTTGTACAGGT
Locus tag: Pnap_1199
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Pnap_1200
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: Pnap_1201
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE-yjbJ-parC -64 5.4 AACTGTATGTTTGTACAGGT Pnap_1199
Polaromonas sp. JS666
Position: -114
Score: 5.29311
Sequence: AACTGGGTATTTATCCAGTA
Locus tag: Bpro_3165
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Bpro_3164
Name: yjbJ
Funciton: Conserved hypothetical protein, similar to lytic transglycosylase
Locus tag: Bpro_3163
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE-yjbJ-parC -114 5.3 AACTGGGTATTTATCCAGTA Bpro_3165