Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF04055 gene

Properties
Regulog: LexA - Comamonadaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/beta
Built upon 71 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -42
Score: 6.10062
Sequence: AACTGTATATTCATACAGTT
Locus tag: Aave_2176
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -42 6.1 AACTGTATATTCATACAGTT Aave_2176
Acidovorax sp. JS42
Position: -23
Score: 4.94001
Sequence: TGCTGGATGAAATCACAGTA
Locus tag: Ajs_2803
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -23 4.9 TGCTGGATGAAATCACAGTA Ajs_2803
Delftia acidovorans SPH-1
Position: 2
Score: 5.55607
Sequence: GACTGTATTTTTATACAGTT
Locus tag: Daci_2403
Name: PF04055
Funciton: DNA repair photolyase
PF04055 2 5.6 GACTGTATTTTTATACAGTT Daci_2403
Leptothrix cholodnii SP-6
Position: -39
Score: 5.13262
Sequence: AACTGTATGCGCATACAGTT
Locus tag: Lcho_2079
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -39 5.1 AACTGTATGCGCATACAGTT Lcho_2079
Methylibium petroleiphilum PM1
Position: -33
Score: 6.03826
Sequence: TACTGTACAAAAATACAGTA
Locus tag: Mpe_A2509
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -33 6 TACTGTACAAAAATACAGTA Mpe_A2509
Polaromonas sp. JS666
Position: -137
Score: 5.29311
Sequence: AACTGGGTATTTATCCAGTA
Locus tag: Bpro_3135
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -137 5.3 AACTGGGTATTTATCCAGTA Bpro_3135
Variovorax paradoxus S110
Position: -40
Score: 5.86341
Sequence: TACTGTGTAAACATACAGTA
Locus tag: Vapar_1693
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -40 5.9 TACTGTGTAAACATACAGTA Vapar_1693
© 2009-2020 RegPrecise