Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xerD gene

Properties
Regulog: LexA - Vibrionales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 186 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -78
Score: 4.41322
Sequence: TACTGTGTTTATATCCATGC
Locus tag: PBPRA0566
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: PBPRA0567
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: PBPRA0568
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-recJ -78 4.4 TACTGTGTTTATATCCATGC PBPRA0566
Vibrio angustum S14
Position: -55
Score: 4.54076
Sequence: TACTGTGTTTTTATCCATGT
Locus tag: VAS14_07634
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VAS14_07629
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VAS14_07624
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-recJ -55 4.5 TACTGTGTTTTTATCCATGT VAS14_07634
Vibrio fischeri ES114
Position: -51
Score: 4.99869
Sequence: TACTGTAATTCTAACCAGTG
Locus tag: VF_0448
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VF_0449
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VF_0450
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-recJ -51 5 TACTGTAATTCTAACCAGTG VF_0448
Vibrio harveyi ATCC BAA-1116
Position: -32
Score: 5.31738
Sequence: TACTGTAAATATAAACAGAT
Locus tag: VIBHAR_00956
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VIBHAR_00957
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VIBHAR_00958
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-recJ -32 5.3 TACTGTAAATATAAACAGAT VIBHAR_00956
Vibrio salmonicida LFI1238
Position: -45
Score: 5.21354
Sequence: TACTGTAATTCTAACCAGTA
Locus tag: VSAL_I0562
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VSAL_I0563
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VSAL_I0564
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-recJ -45 5.2 TACTGTAATTCTAACCAGTA VSAL_I0562
Vibrio shilonii AK1
Position: -21
Score: 5.24511
Sequence: TACTGTATAAACATCCAAGA
Locus tag: VSAK1_11208
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VSAK1_11203
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VSAK1_11198
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VSAK1_11193
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
xerD-dsbC-dsbC-recJ -21 5.2 TACTGTATAAACATCCAAGA VSAK1_11208